RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 C11orf49Q9H6J7 331 aa2.22□□□□□ -2.05
SNRPF-202ENST00000549580 HRASLSQ9HDD0 168 aa2.22□□□□□ -2.05
SNRPF-202ENST00000549580 ACOX3O15254 700 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 IL6P05231 212 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 ATP5G1P05496 136 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 SERPINA6P08185 405 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 OR4A8P0C604 315 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 OR12D1P0DN82 309 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 ORM2P19652 201 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 CXCL3P19876 107 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 RPS12P25398 132 aaKnown RBP2.21□□□□□ -2.06
SNRPF-202ENST00000549580 CXCR4P61073 352 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 SLC35A2P78381 396 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 MRPS15P82914 257 aaKnown RBP2.21□□□□□ -2.06
SNRPF-202ENST00000549580 EBPQ15125 230 aaKnown RBP2.21□□□□□ -2.06
SNRPF-202ENST00000549580 BCL2A1Q16548 175 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 MESTQ5EB52 335 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 Q6ZQT7 251 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 YIPF7Q8N8F6 280 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 TMEM75Q8N9X5 138 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 BPIFB6Q8NFQ5 453 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 HAVCR2Q8TDQ0 301 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 ACY3Q96HD9 319 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 RTBDNQ9BSG5 229 aaPredicted RBP2.21□□□□□ -2.06
SNRPF-202ENST00000549580 MED18Q9BUE0 208 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 TAS2R1Q9NYW7 299 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 GUCA1BQ9UMX6 200 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 POLR1DQ9Y2S0 133 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 HDGFL3Q9Y3E1 203 aa2.21□□□□□ -2.06
SNRPF-202ENST00000549580 YLPM1P49750 1951 aaKnown RBP2.21□□□□□ -2.06
SNRPF-202ENST00000549580 CHD2O14647 1828 aaKnown RBP2.21□□□□□ -2.06
SNRPF-202ENST00000549580 NPATQ14207 1427 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 A6NED7 52 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 VGLL3A8MV65 326 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 H3BMM0 161 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 STK16O75716 305 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 DCTN3O75935 186 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 IGLV3-19P01714 112 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 IGHV3-53P01767 116 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 HLA-DRAP01903 254 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 IL3P08700 152 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 OR13C7P0DN81 318 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 CXCL2P19875 107 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 CRABP2P29373 138 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 GABRA3P34903 492 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 CDKN2CP42773 168 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 ACTBP60709 375 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 ACTG1P63261 375 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 PDK2Q15119 407 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 UAP1Q16222 522 aaPredicted RBP2.2□□□□□ -2.06
SNRPF-202ENST00000549580 LCN8Q6JVE9 175 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 RASSF6Q6ZTQ3 369 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 LYZL2Q7Z4W2 148 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 SLC51BQ86UW2 128 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 NAA40Q86UY6 237 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 COMMD7Q86VX2 200 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 MFSD8Q8NHS3 518 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 UBE2WQ96B02 151 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 ABHD14BQ96IU4 210 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 ZNF286AQ9HBT8 521 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 ZNF230Q9UIE0 474 aaPredicted RBP2.2□□□□□ -2.06
SNRPF-202ENST00000549580 C3orf18Q9UK00 162 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 DNAJC12Q9UKB3 198 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 PHLDA3Q9Y5J5 127 aa2.2□□□□□ -2.06
SNRPF-202ENST00000549580 MYO5BQ9ULV0 1848 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 SEC16AO15027 2179 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 SSH2Q76I76 1423 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 NUP205Q92621 2012 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 TRAV8-1A0A0A6YYK1 113 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 A0A0B4J2C4 111 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 C5orf49A4QMS7 147 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 C15orf65H3BRN8 121 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 EEF1E1O43324 174 aaKnown RBP2.19□□□□□ -2.06
SNRPF-202ENST00000549580 DENRO43583 198 aaKnown RBP2.19□□□□□ -2.06
SNRPF-202ENST00000549580 CD5P06127 495 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 ZNF7P17097 686 aaPredicted RBP2.19□□□□□ -2.06
SNRPF-202ENST00000549580 MYL12AP19105 171 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 PRPS1L1P21108 318 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 DDTP30046 118 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 HSPA9P38646 679 aaKnown RBP2.19□□□□□ -2.06
SNRPF-202ENST00000549580 OR1E2P47887 323 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 FOXA1P55317 472 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 KLF3P57682 345 aaPredicted RBP2.19□□□□□ -2.06
SNRPF-202ENST00000549580 TMEM267Q0VDI3 215 aaPredicted RBP2.19□□□□□ -2.06
SNRPF-202ENST00000549580 FADDQ13158 208 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 LGALSLQ3ZCW2 172 aaPredicted RBP2.19□□□□□ -2.06
SNRPF-202ENST00000549580 ACSM3Q53FZ2 586 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 CLVS2Q5SYC1 327 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 N4BP2L1Q5TBK1 243 aaPredicted RBP2.19□□□□□ -2.06
SNRPF-202ENST00000549580 ATP5L2Q7Z4Y8 100 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 LYPD1Q8N2G4 141 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 CCDC112Q8NEF3 446 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 OR11G2Q8NGC1 345 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 OTUB2Q96DC9 234 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 STACQ99469 402 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 PAIP2Q9BPZ3 127 aaKnown RBP2.19□□□□□ -2.06
SNRPF-202ENST00000549580 MED28Q9H204 178 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 HES4Q9HCC6 221 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 RPUSD1Q9UJJ7 312 aaKnown RBP2.19□□□□□ -2.06
SNRPF-202ENST00000549580 DKKL1Q9UK85 242 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms