RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GHRLQ9UBU3 117 aa5.27□□□□□ -1.57
SCAF11-211ENST00000547950 FAM90A10PA6NDY2 464 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 FAM90A7PA6NKC0 464 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 FAM90A23PA8MXZ1 464 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 CCL24O00175 119 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 TXNL1O43396 289 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 LANCL1O43813 399 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 RRP9O43818 475 aaKnown RBP5.26□□□□□ -1.57
SCAF11-211ENST00000547950 SC5DO75845 299 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 CDK1P06493 297 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 HSMCR30P0CW71 290 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 SLC2A2P11168 524 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-211ENST00000547950 SRMP19623 302 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 VDAC1P21796 283 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 MYF6P23409 242 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 HTR2CP28335 458 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 SLC6A1P30531 599 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 OR3A3P47888 321 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 FOXE3Q13461 319 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 SPHARQ15513 63 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 MED22Q15528 200 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 DEFB136Q30KP8 78 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 TMEM30BQ3MIR4 351 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 Q3ZCU0 254 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 RBM48Q5RL73 367 aaKnown RBP5.26□□□□□ -1.57
SCAF11-211ENST00000547950 C6orf141Q5SZD1 244 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 C6orf201Q7Z4U5 140 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 LRRTM1Q86UE6 522 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 SETD6Q8TBK2 473 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 MRPL30Q8TCC3 161 aaKnown RBP5.26□□□□□ -1.57
SCAF11-211ENST00000547950 IL1F10Q8WWZ1 152 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 THRSPQ92748 146 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 TMEM203Q969S6 136 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 GALMQ96C23 342 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 RAX2Q96IS3 184 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 P2RX4Q99571 388 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 SULT4A1Q9BR01 284 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 MCRIP2Q9BUT9 160 aaKnown RBP5.26□□□□□ -1.57
SCAF11-211ENST00000547950 MND1Q9BWT6 205 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 GPR61Q9BZJ8 451 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 VCXQ9H320 206 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 KCNK15Q9H427 330 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 CHMP1AQ9HD42 196 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-211ENST00000547950 MBNL3Q9NUK0 354 aaKnown RBP5.26□□□□□ -1.57
SCAF11-211ENST00000547950 FKBP14Q9NWM8 211 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 SCN3BQ9NY72 215 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 ABRACLQ9P1F3 81 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 LRRC42Q9Y546 428 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 WSB1Q9Y6I7 421 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 NOTCH3Q9UM47 2321 aa5.26□□□□□ -1.57
SCAF11-211ENST00000547950 CASQ2O14958 399 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-211ENST00000547950 YPEL1O60688 119 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 RGS11O94810 467 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 ELANEP08246 267 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 UBBP0CG47 229 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 CNTFRP26992 372 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 CHATP28329 748 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 BLVRBP30043 206 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-211ENST00000547950 CDX1P47902 265 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-211ENST00000547950 ZNF137PP52743 207 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 ACTBP60709 375 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 RPS27AP62979 156 aaKnown RBP5.25□□□□□ -1.57
SCAF11-211ENST00000547950 HTD2P86397 168 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 CD69Q07108 199 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 EGFEM1PQ0D2K5 195 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 LSAMPQ13449 338 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 KIR2DS1Q14954 304 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 P2RY14Q15391 338 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 MMDQ15546 238 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 HSD17B12Q53GQ0 312 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 C1orf100Q5SVJ3 147 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 LIPKQ5VXJ0 399 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 RNLSQ5VYX0 342 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 ZNF554Q86TJ5 538 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 ODF3L1Q8IXM7 274 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 FAM71E2Q8N5Q1 922 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 OR2AK2Q8NG84 335 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 KCNG3Q8TAE7 436 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 KCTD7Q96MP8 289 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 YPEL2Q96QA6 119 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 OR5B12Q96R08 314 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 NABP2Q9BQ15 211 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 ZNF251Q9BRH9 671 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 NICN1Q9BSH3 213 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 ABHD14AQ9BUJ0 271 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 MRPL20Q9BYC9 149 aaKnown RBP5.25□□□□□ -1.57
SCAF11-211ENST00000547950 KLK15Q9H2R5 256 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 PLEKHJ1Q9NW61 149 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 NKX1-2Q9UD57 310 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-211ENST00000547950 STEAP1Q9UHE8 339 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 ZNF107Q9UII5 783 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-211ENST00000547950 JPT1Q9UK76 154 aa5.25□□□□□ -1.57
SCAF11-211ENST00000547950 PRKDCP78527 4128 aaKnown RBP5.25□□□□□ -1.57
SCAF11-211ENST00000547950 SAA2-SAA4A0A096LPE2 208 aa5.24□□□□□ -1.57
SCAF11-211ENST00000547950 G3V318 75 aa5.24□□□□□ -1.57
SCAF11-211ENST00000547950 SLC22A1O15245 554 aa5.24□□□□□ -1.57
SCAF11-211ENST00000547950 SOCS1O15524 211 aa5.24□□□□□ -1.57
SCAF11-211ENST00000547950 IGHG4P01861 327 aa5.24□□□□□ -1.57
SCAF11-211ENST00000547950 IGF1P05019 195 aa5.24□□□□□ -1.57
SCAF11-211ENST00000547950 SAA2P0DJI9 122 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms