RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 CLDN34H7C241 214 aa16.78■□□□□ 0.28
SCARB1-211ENST00000546215 RGS11O94810 467 aa16.78■□□□□ 0.28
SCARB1-211ENST00000546215 ZBTB25P24278 435 aa16.78■□□□□ 0.28
SCARB1-211ENST00000546215 CEACAM3P40198 252 aa16.78■□□□□ 0.28
SCARB1-211ENST00000546215 AANATQ16613 207 aa16.78■□□□□ 0.28
SCARB1-211ENST00000546215 TPTE2P1Q5T6R2 138 aa16.78■□□□□ 0.28
SCARB1-211ENST00000546215 GVQW1Q8N7I0 195 aa16.78■□□□□ 0.28
SCARB1-211ENST00000546215 SSX3Q99909 188 aa16.78■□□□□ 0.28
SCARB1-211ENST00000546215 EXTL2Q9UBQ6 330 aa16.78■□□□□ 0.28
SCARB1-211ENST00000546215 DIRAS3O95661 229 aa16.77■□□□□ 0.28
SCARB1-211ENST00000546215 CEACAM6P40199 344 aa16.77■□□□□ 0.28
SCARB1-211ENST00000546215 UBA52P62987 128 aaKnown RBP16.77■□□□□ 0.28
SCARB1-211ENST00000546215 MADCAM1Q13477 382 aa16.77■□□□□ 0.28
SCARB1-211ENST00000546215 LRRC75BQ2VPJ9 315 aa16.77■□□□□ 0.28
SCARB1-211ENST00000546215 TMEM86BQ8N661 226 aa16.77■□□□□ 0.28
SCARB1-211ENST00000546215 PIFOQ8TCI5 191 aa16.77■□□□□ 0.28
SCARB1-211ENST00000546215 ABHD14AQ9BUJ0 271 aa16.77■□□□□ 0.28
SCARB1-211ENST00000546215 PARP12Q9H0J9 701 aaKnown RBP16.77■□□□□ 0.28
SCARB1-211ENST00000546215 DPAGT1Q9H3H5 408 aa16.77■□□□□ 0.28
SCARB1-211ENST00000546215 POMT1Q9Y6A1 747 aa16.77■□□□□ 0.28
SCARB1-211ENST00000546215 TRBV6-7A0A0A0MS04 114 aa16.77■□□□□ 0.27
SCARB1-211ENST00000546215 HSPA12AO43301 675 aa16.77■□□□□ 0.27
SCARB1-211ENST00000546215 PRSS3P35030 304 aa16.77■□□□□ 0.27
SCARB1-211ENST00000546215 CBX5P45973 191 aa16.77■□□□□ 0.27
SCARB1-211ENST00000546215 DIAPH2-AS1Q14236 149 aa16.77■□□□□ 0.27
SCARB1-211ENST00000546215 PLA1AQ53H76 456 aa16.77■□□□□ 0.27
SCARB1-211ENST00000546215 CNIH2Q6PI25 160 aa16.77■□□□□ 0.27
SCARB1-211ENST00000546215 HOGA1Q86XE5 327 aa16.77■□□□□ 0.27
SCARB1-211ENST00000546215 ST6GALNAC6Q969X2 333 aa16.77■□□□□ 0.27
SCARB1-211ENST00000546215 TOLLIPQ9H0E2 274 aa16.77■□□□□ 0.27
SCARB1-211ENST00000546215 ADAM30Q9UKF2 790 aa16.77■□□□□ 0.27
SCARB1-211ENST00000546215 MEIS3P1A6NDR6 274 aa16.76■□□□□ 0.27
SCARB1-211ENST00000546215 ITGB1BP1O14713 200 aa16.76■□□□□ 0.27
SCARB1-211ENST00000546215 BET1O15155 118 aa16.76■□□□□ 0.27
SCARB1-211ENST00000546215 SNX29P2Q8IUI4 249 aa16.76■□□□□ 0.27
SCARB1-211ENST00000546215 BEST4Q8NFU0 473 aa16.76■□□□□ 0.27
SCARB1-211ENST00000546215 OR2AK2Q8NG84 335 aa16.76■□□□□ 0.27
SCARB1-211ENST00000546215 RPEQ96AT9 228 aa16.76■□□□□ 0.27
SCARB1-211ENST00000546215 TNFRSF19Q9NS68 423 aa16.76■□□□□ 0.27
SCARB1-211ENST00000546215 ANXA10Q9UJ72 324 aa16.76■□□□□ 0.27
SCARB1-211ENST00000546215 A3GALT2U3KPV4 340 aa16.76■□□□□ 0.27
SCARB1-211ENST00000546215 OOSP1A8MZH6 123 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 H3BUX3 64 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 TPPPO94811 219 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 RNASE1P07998 156 aaKnown RBP16.75■□□□□ 0.27
SCARB1-211ENST00000546215 RAB13P51153 203 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 DYNLT3P51808 116 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 ZNF137PP52743 207 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 OR10J5Q8NHC4 309 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 GPX8Q8TED1 209 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 SNAPC3Q92966 411 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 ABHD1Q96SE0 405 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 AGMATQ9BSE5 352 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 CHIAQ9BZP6 476 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 MMP27Q9H306 513 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 RDH8Q9NYR8 311 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 ANAPC10Q9UM13 185 aa16.75■□□□□ 0.27
SCARB1-211ENST00000546215 A6NHS1 94 aa16.74■□□□□ 0.27
SCARB1-211ENST00000546215 TRIM77I1YAP6 450 aa16.74■□□□□ 0.27
SCARB1-211ENST00000546215 LPLP06858 475 aa16.74■□□□□ 0.27
SCARB1-211ENST00000546215 CCDC144NLQ6NUI1 221 aa16.74■□□□□ 0.27
SCARB1-211ENST00000546215 ODF3L1Q8IXM7 274 aa16.74■□□□□ 0.27
SCARB1-211ENST00000546215 OR5R1Q8NH85 324 aa16.74■□□□□ 0.27
SCARB1-211ENST00000546215 TOMM40LQ969M1 308 aa16.74■□□□□ 0.27
SCARB1-211ENST00000546215 DIRAS2Q96HU8 199 aa16.74■□□□□ 0.27
SCARB1-211ENST00000546215 C11orf54Q9H0W9 315 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-211ENST00000546215 IFI27L2Q9H2X8 130 aa16.74■□□□□ 0.27
SCARB1-211ENST00000546215 SCPEP1Q9HB40 452 aa16.74■□□□□ 0.27
SCARB1-211ENST00000546215 HSD17B6O14756 317 aa16.73■□□□□ 0.27
SCARB1-211ENST00000546215 ST8SIA5O15466 376 aa16.73■□□□□ 0.27
SCARB1-211ENST00000546215 FCER2P06734 321 aa16.73■□□□□ 0.27
SCARB1-211ENST00000546215 CTXN2P0C2S0 81 aa16.73■□□□□ 0.27
SCARB1-211ENST00000546215 IL3RAP26951 378 aa16.73■□□□□ 0.27
SCARB1-211ENST00000546215 ZNF816Q0VGE8 651 aaPredicted RBP16.73■□□□□ 0.27
SCARB1-211ENST00000546215 LYG1Q8N1E2 194 aa16.73■□□□□ 0.27
SCARB1-211ENST00000546215 ZFAND2BQ8WV99 257 aa16.73■□□□□ 0.27
SCARB1-211ENST00000546215 EDARADDQ8WWZ3 215 aa16.73■□□□□ 0.27
SCARB1-211ENST00000546215 A0A1W2PPI3 338 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 SULT1C2O00338 296 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 TNFSF8P32971 234 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 RAB7AP51149 207 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 C16orf87Q6PH81 154 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 RTN4IP1Q8WWV3 396 aaPredicted RBP16.72■□□□□ 0.27
SCARB1-211ENST00000546215 IFT46Q9NQC8 304 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 ABCB10Q9NRK6 738 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 VPREB3Q9UKI3 123 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 BTBD17A6NE02 478 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 GAPDHP04406 335 aaKnown RBP16.72■□□□□ 0.27
SCARB1-211ENST00000546215 NAT1P18440 290 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 REG1BP48304 166 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 H1FOOQ8IZA3 346 aaPredicted RBP16.72■□□□□ 0.27
SCARB1-211ENST00000546215 OR8H3Q8N146 312 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 FAM216AQ8WUB2 273 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 C15orf40Q8WUR7 153 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 GINS4Q9BRT9 223 aa16.72■□□□□ 0.27
SCARB1-211ENST00000546215 ARHGDIBP52566 201 aa16.71■□□□□ 0.27
SCARB1-211ENST00000546215 KRTAP24-1Q3LI83 254 aa16.71■□□□□ 0.27
SCARB1-211ENST00000546215 SOSTQ9BQB4 213 aa16.71■□□□□ 0.27
SCARB1-211ENST00000546215 SAA2-SAA4A0A096LPE2 208 aa16.7■□□□□ 0.26
SCARB1-211ENST00000546215 IGHV1-3A0A0C4DH29 117 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 241.1 ms