RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 FUT5Q11128 374 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 PMS2P3Q13401 168 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 AQP6Q13520 282 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 ALKBH6Q3KRA9 238 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 ARHGAP11BQ3KRB8 267 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF404Q494X3 552 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 PDZK1Q5T2W1 519 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 RPS27LQ71UM5 84 aaKnown RBP1.89□□□□□ -2.11
SNHG1-224ENST00000545688 EIF3MQ7L2H7 374 aaKnown RBP1.89□□□□□ -2.11
SNHG1-224ENST00000545688 SBSPONQ8IVN8 264 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 C20orf196Q8IYI0 205 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF101Q8IZC7 436 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 SPERTQ8NA61 448 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 FNDC5Q8NAU1 212 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 SDR9C7Q8NEX9 313 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 MFSD8Q8NHS3 518 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 KLF14Q8TD94 323 aaPredicted RBP1.89□□□□□ -2.11
SNHG1-224ENST00000545688 C11orf40Q8WZ69 217 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 UFD1Q92890 307 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 MAGOHBQ96A72 148 aaKnown RBP1.89□□□□□ -2.11
SNHG1-224ENST00000545688 CIDECQ96AQ7 238 aaPredicted RBP1.89□□□□□ -2.11
SNHG1-224ENST00000545688 TUBGCP3Q96CW5 907 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 SLC41A3Q96GZ6 507 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF382Q96SR6 550 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 RHOXF2Q9BQY4 288 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 BCL2L14Q9BZR8 327 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 CENPHQ9H3R5 247 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 ELOVL6Q9H5J4 265 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 HMG20AQ9NP66 347 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 FBXL3Q9UKT7 428 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 SNX6Q9UNH7 406 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 SORL1Q92673 2214 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 GNG14A0A1W2PPG7 69 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 TCRBV9S1A1TA0A576 114 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 ISPDA4D126 451 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 CLDN24A6NM45 220 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 ENSAO43768 121 aaKnown RBP1.88□□□□□ -2.11
SNHG1-224ENST00000545688 CHST1O43916 411 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 RAMP3O60896 148 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 UBL3O95164 117 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 BAG2O95816 211 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 AK1P00568 194 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 CSTAP01040 98 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 IL4P05112 153 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 FBP1P09467 338 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 TFPTP0C1Z6 253 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 CALCBP10092 127 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 CCL2P13500 99 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 GFAPP14136 432 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 ATP6V1C1P21283 382 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 KITLGP21583 273 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 RPS4Y1P22090 263 aaKnown RBP1.88□□□□□ -2.11
SNHG1-224ENST00000545688 IL12AP29459 219 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 AQP5P55064 265 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 TPM4P67936 248 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 TNFAIP6P98066 277 aaPredicted RBP1.88□□□□□ -2.11
SNHG1-224ENST00000545688 OR7A5Q15622 319 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 DUSP7Q16829 419 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 THEM4Q5T1C6 240 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 TTC19Q6DKK2 380 aaPredicted RBP1.88□□□□□ -2.11
SNHG1-224ENST00000545688 ZFAND6Q6FIF0 208 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 TMEM225Q6GV28 225 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 HCP5Q6MZN7 132 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 ANKRD26P1Q6NSI1 321 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 CNIH2Q6PI25 160 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 OLIG3Q7RTU3 272 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 DPPA2Q7Z7J5 298 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 COMTD1Q86VU5 262 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 EGFL6Q8IUX8 553 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 LRRC8AQ8IWT6 810 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 PDIK1LQ8N165 341 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 LY6G5BQ8NDX9 201 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 FBXO36Q8NEA4 188 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 SLC30A7Q8NEW0 376 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 TMEM54Q969K7 222 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 DDIT4LQ96D03 193 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 PLEKHA8Q96JA3 519 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 OR7D2Q96RA2 312 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF607Q96SK3 696 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 P2RX4Q99571 388 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 TM2D3Q9BRN9 247 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 CDCA4Q9BXL8 241 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 PPA2Q9H2U2 334 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 C1orf198Q9H425 327 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 ELOVL3Q9HB03 270 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 POLE3Q9NRF9 147 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 TMCO1Q9UM00 188 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 SLC35A3Q9Y2D2 325 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 KPTNQ9Y664 436 aa1.88□□□□□ -2.11
SNHG1-224ENST00000545688 IGKV1D-42A0A075B6H8 117 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 A0A1B0GVI7 797 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 A8MT66 165 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 VGLL3A8MV65 326 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 M0R3G1 203 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 RAD51CO43502 376 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 SCN2BO60939 215 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 RAB36O95755 333 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 KRT16P08779 473 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 RBP1P09455 135 aa1.87□□□□□ -2.11
SNHG1-224ENST00000545688 TPM1P09493 284 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms