RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PSMB3P49720 205 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 TAS2R60P59551 318 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 GNG3P63215 75 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 SLC38A11Q08AI6 406 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 TESK1Q15569 626 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 ADIRFQ15847 76 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 ATP6V1FQ16864 119 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 WIPI1Q5MNZ9 446 aaPredicted RBP7.43□□□□□ -1.22
TDP1-204ENST00000545686 TMEM14EPQ6UXP3 125 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 C16orf82Q7Z2V1 217 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 FAM58AQ8N1B3 248 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 OR51G1Q8NGK1 321 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 IFI44Q8TCB0 444 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 LHX4Q969G2 390 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 ANAPC16Q96DE5 110 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 OR4C12Q96R67 309 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 ZNF576Q9H609 170 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 SLC39A9Q9NUM3 307 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 DLL3Q9NYJ7 618 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 WNT16Q9UBV4 365 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 MED12LQ86YW9 2145 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 CTXND1A0A1B0GTU2 59 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 ANKRD30BLA7E2S9 258 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 PPP5D1E7EU14 171 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 H7BYZ3 331 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 HRASP01112 189 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 GZMBP10144 247 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 FOSL1P15407 271 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 ARR3P36575 388 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 LYSMD4Q5XG99 296 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 TMEM170AQ8WVE7 144 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 ZNF552Q9H707 407 aaPredicted RBP7.42□□□□□ -1.22
TDP1-204ENST00000545686 PRDM6Q9NQX0 595 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 MYO15AQ9UKN7 3530 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 UBE2L5PA0A1B0GUS4 154 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 ARGFXA6NJG6 315 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 TRAPPC6AO75865 159 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 VENTXO95231 258 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 TYMSP04818 313 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 CCNOP22674 350 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 GDF1P27539 372 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 HOXA6P31267 233 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 SRP14P37108 136 aaKnown RBP7.42□□□□□ -1.22
TDP1-204ENST00000545686 GALR1P47211 349 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 RPL23P62829 140 aaKnown RBP7.42□□□□□ -1.22
TDP1-204ENST00000545686 COL10A1Q03692 680 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 ACOT6Q3I5F7 207 aaPredicted RBP7.42□□□□□ -1.22
TDP1-204ENST00000545686 Q3ZCU0 254 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 ZNF585BQ52M93 769 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 BEND2Q8NDZ0 799 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 RDH5Q92781 318 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 MEGF10Q96KG7 1140 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 OR1A1Q9P1Q5 309 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 GAB2Q9UQC2 676 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 LAMP3Q9UQV4 416 aa7.42□□□□□ -1.22
TDP1-204ENST00000545686 A0A1B0GV90 55 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 A8MWP6 167 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 J3QT63 122 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 HS3ST1O14792 307 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 GDF9O60383 454 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 GGCTO75223 188 aaKnown RBP7.41□□□□□ -1.22
TDP1-204ENST00000545686 CXCL12P48061 93 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 ELLP55199 621 aaPredicted RBP7.41□□□□□ -1.22
TDP1-204ENST00000545686 RAB4BP61018 213 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 IZUMO4Q1ZYL8 232 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 SPANXN5Q5MJ07 72 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 Q6P435 159 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 SLC23A3Q6PIS1 610 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 ZNF497Q6ZNH5 498 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 Q8IYB0 196 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 RPP25LQ8N5L8 163 aaKnown RBP7.41□□□□□ -1.22
TDP1-204ENST00000545686 BTF3L4Q96K17 158 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 POM121L2Q96KW2 1035 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 TMEM147Q9BVK8 224 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 PRO1933Q9H354 126 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 HSPB7Q9UBY9 170 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 BOKQ9UMX3 212 aaPredicted RBP7.41□□□□□ -1.22
TDP1-204ENST00000545686 TP53TG5Q9Y2B4 290 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 XKRY2A2RUG3 117 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 NTN3O00634 580 aaPredicted RBP7.41□□□□□ -1.22
TDP1-204ENST00000545686 ST8SIA5O15466 376 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 IGHV3-9P01782 118 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 TNFRSF9Q07011 255 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 ACTL10Q5JWF8 245 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 PPP1R32Q7Z5V6 425 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.41□□□□□ -1.22
TDP1-204ENST00000545686 ZBTB34Q8NCN2 500 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 IL1F10Q8WWZ1 152 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 NDUFAF3Q9BU61 184 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 PARLQ9H300 379 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 OR51I2Q9H344 312 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 PPP1R3CQ9UQK1 317 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 PCSK5Q92824 1860 aa7.41□□□□□ -1.22
TDP1-204ENST00000545686 IGKV1D-33P01593 117 aa7.4□□□□□ -1.22
TDP1-204ENST00000545686 IGKV1-33P01594 117 aa7.4□□□□□ -1.22
TDP1-204ENST00000545686 PLP2Q04941 152 aa7.4□□□□□ -1.22
TDP1-204ENST00000545686 MSMO1Q15800 293 aa7.4□□□□□ -1.22
TDP1-204ENST00000545686 HLA-BQ31612 363 aa7.4□□□□□ -1.22
TDP1-204ENST00000545686 CISD2Q8N5K1 135 aaKnown RBP7.4□□□□□ -1.22
TDP1-204ENST00000545686 PRRG4Q9BZD6 226 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms