RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 PRTN3P24158 256 aa7.54□□□□□ -1.2
ATXN3-216ENST00000545170 MC5RP33032 325 aa7.54□□□□□ -1.2
ATXN3-216ENST00000545170 GFRA1P56159 465 aa7.54□□□□□ -1.2
ATXN3-216ENST00000545170 OR52M1Q8NGK5 317 aa7.54□□□□□ -1.2
ATXN3-216ENST00000545170 LOXL4Q96JB6 756 aa7.54□□□□□ -1.2
ATXN3-216ENST00000545170 FZR1Q9UM11 496 aa7.54□□□□□ -1.2
ATXN3-216ENST00000545170 HOXA3O43365 443 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 NDUFA3O95167 84 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HBBP68871 147 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HYAL1Q12794 435 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 ALKBH3Q96Q83 286 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 PRDM13Q9H4Q3 707 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 GEMIN7Q9H840 131 aaKnown RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 GDE1Q9NZC3 331 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 IL36BQ9NZH7 164 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 OR51B2Q9Y5P1 312 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 EML2O95834 649 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 ACSF3Q4G176 576 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 RNFT1Q5M7Z0 435 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 TCF23Q7RTU1 214 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 POC1AQ8NBT0 407 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 KLHDC9Q8NEP7 349 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 ABHD14BQ96IU4 210 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 TXNDC17Q9BRA2 123 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 LPAR2Q9HBW0 351 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 GPR6P46095 362 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 YBX1P67809 324 aaKnown RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 NOGQ13253 232 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 DEFB115Q30KQ5 88 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 RND1Q92730 232 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 TAF15Q92804 592 aaKnown RBP eCLIP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 CHST5Q9GZS9 411 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 AKAP12Q02952 1782 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 KLRC4-KLRK1H3BQV0 150 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 APOHP02749 345 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 PIGYQ3MUY2 71 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 DCAF10Q5QP82 559 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 OR4X2Q8NGF9 303 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 TMEM170AQ8WVE7 144 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 FOXB1Q99853 325 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 SSBP3Q9BWW4 388 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 ST6GALNAC2Q9UJ37 374 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HCFC2Q9Y5Z7 792 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 NDUFB3O43676 98 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 CXCL13O43927 109 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 APELAP0DMC3 54 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 UNQ5815/PRO19632Q6UWF5 114 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 ZNF562Q6V9R5 426 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 OR4C3Q8NH37 302 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 FGF14Q92915 247 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST1H2BLQ99880 126 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 PRSS27Q9BQR3 290 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 DUSP23Q9BVJ7 150 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 SELENOKQ9Y6D0 94 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 TRAV9-2A0A087WT02 112 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 IGHV3-21A0A0B4J1V1 117 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 A0A0U1RQV5 110 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST1H2BKO60814 126 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST1H2BJP06899 126 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST1H2BOP23527 126 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 CRYBB3P26998 211 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST1H2BBP33778 126 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 FOXA3P55318 350 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST1H2BDP58876 126 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST1H2BCP62807 126 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 SRSF3P84103 164 aaKnown RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 PAX2Q02962 417 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST2H2BEQ16778 126 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 SLC36A1Q7Z2H8 476 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 OR52E5Q8NH55 327 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 SRSF12Q8WXF0 261 aaKnown RBP7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST1H2BHQ93079 126 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST1H2BNQ99877 126 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 HIST1H2BMQ99879 126 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 PLA2G3Q9NZ20 509 aa7.53□□□□□ -1.2
ATXN3-216ENST00000545170 TNFSF13O75888 250 aa7.52□□□□□ -1.2
ATXN3-216ENST00000545170 RBPJQ06330 500 aa7.52□□□□□ -1.2
ATXN3-216ENST00000545170 SLC25A40Q8TBP6 338 aa7.52□□□□□ -1.2
ATXN3-216ENST00000545170 TOX2Q96NM4 488 aa7.52□□□□□ -1.2
ATXN3-216ENST00000545170 DEFB127Q9H1M4 99 aa7.52□□□□□ -1.2
ATXN3-216ENST00000545170 LCN2P80188 198 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 DCAF12Q5T6F0 453 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 MBNL2Q5VZF2 373 aaKnown RBP7.52□□□□□ -1.21
ATXN3-216ENST00000545170 FAM71F2Q6NXP2 309 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 TCF24Q7RTU0 167 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 HIST3H2BBQ8N257 126 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 NAT6Q93015 286 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 NAA38Q9BRA0 125 aaKnown RBP7.52□□□□□ -1.21
ATXN3-216ENST00000545170 TUBA4BQ9H853 241 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 NPVFQ9HCQ7 196 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 MRPS18BQ9Y676 258 aaKnown RBP7.52□□□□□ -1.21
ATXN3-216ENST00000545170 TRAV8-1A0A0A6YYK1 113 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 ZP1P60852 638 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 PPP1CAP62136 330 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 OCIAD2Q56VL3 154 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 TMEM170BQ5T4T1 132 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 C1orf122Q6ZSJ8 110 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 WFDC3Q8IUB2 231 aa7.52□□□□□ -1.21
ATXN3-216ENST00000545170 FADS6Q8N9I5 356 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms