RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 BNIP2Q12982 314 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 DYNC1I2Q13409 638 aaKnown RBP0.89□□□□□ -2.27
YBX3-214ENST00000544501 GPR176Q14439 515 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 TAL2Q16559 108 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 LRRC26Q2I0M4 334 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 CEACAM16Q2WEN9 425 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 Q499Y3 187 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 NKAIN1Q4KMZ8 207 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 DPPA2Q7Z7J5 298 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 LYPD6Q86Y78 171 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 GAPTQ8N292 157 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 OR8K1Q8NGG5 319 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 OR2K2Q8NGT1 345 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 SCGB1C1Q8TD33 95 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 C22orf15Q8WYQ4 148 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 RAD51AP1Q96B01 352 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 UPF3BQ9BZI7 483 aaKnown RBP0.89□□□□□ -2.27
YBX3-214ENST00000544501 GABARAPL1Q9H0R8 117 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 GAL3ST2Q9H3Q3 398 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 RPRD1BQ9NQG5 326 aaKnown RBP0.89□□□□□ -2.27
YBX3-214ENST00000544501 VAPAQ9P0L0 249 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 ZNF706Q9Y5V0 76 aaPredicted RBP0.89□□□□□ -2.27
YBX3-214ENST00000544501 MTCH2Q9Y6C9 303 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 V9GYY9 64 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 APC2O95996 2303 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 PLXNB3Q9ULL4 1909 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 PHIPQ8WWQ0 1821 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 NFAT5O94916 1531 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 NBASA2RRP1 2371 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 NRCAMQ92823 1304 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 PRR14LQ5THK1 2151 aa0.89□□□□□ -2.27
YBX3-214ENST00000544501 GBF1Q92538 1859 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 ACACAQ13085 2346 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 CSPG4Q6UVK1 2322 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 ZNF407Q9C0G0 2248 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 ABCC11Q96J66 1382 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 TSC2P49815 1807 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 ZANQ9Y493 2812 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 TRAV8-7A0A075B6U6 113 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 GSTTP1A0A1W2PQM5 241 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 E7EWF7 191 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 G3V3Q6 166 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 PRMT5O14744 637 aaPredicted RBP0.88□□□□□ -2.27
YBX3-214ENST00000544501 FFAR1O14842 300 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 KDELR3O43731 214 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 CD8AP01732 235 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 MBP02144 154 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 CRYGCP07315 174 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 SOD3P08294 240 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 CGB3P0DN86 165 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 CGB7P0DN87 165 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 LIPCP11150 499 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 CD99P14209 185 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 CSRP1P21291 193 aaKnown RBP0.88□□□□□ -2.27
YBX3-214ENST00000544501 HTR2CP28335 458 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 IL12BP29460 328 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 ZNF83P51522 516 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 XKP51811 444 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 CCL23P55773 120 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 WDR43Q15061 677 aaKnown RBP eCLIP0.88□□□□□ -2.27
YBX3-214ENST00000544501 TNXAQ16473 311 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 BCL2A1Q16548 175 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 TMEM241Q24JQ0 296 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 NDUFAF6Q330K2 333 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 PYCR3Q53H96 274 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 N4BP2L1Q5TBK1 243 aaPredicted RBP0.88□□□□□ -2.27
YBX3-214ENST00000544501 ZNF773Q6PK81 442 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 CYHR1Q6ZMK1 362 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 TPGS1Q6ZTW0 290 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 GALNT10Q86SR1 603 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 OR2M3Q8NG83 312 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 OR6K2Q8NGY2 324 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 OR6K3Q8NGY3 331 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 OR6N2Q8NGY6 317 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 DOK4Q8TEW6 326 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 KIAA1143Q96AT1 154 aaPredicted RBP0.88□□□□□ -2.27
YBX3-214ENST00000544501 OLFM3Q96PB7 478 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 VAT1Q99536 393 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 CHID1Q9BWS9 393 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 NXF2Q9GZY0 626 aaKnown RBP0.88□□□□□ -2.27
YBX3-214ENST00000544501 PORCNQ9H237 461 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 SYT4Q9H2B2 425 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 ACOT13Q9NPJ3 140 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 DIABLOQ9NR28 239 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 TMEM106BQ9NUM4 274 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 DNAJC27Q9NZQ0 273 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 RABL2AQ9UBK7 228 aaPredicted RBP0.88□□□□□ -2.27
YBX3-214ENST00000544501 SLC22A14Q9Y267 594 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 MGAM2Q2M2H8 2515 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 SACSQ9NZJ4 4579 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 TENM2Q9NT68 2774 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 MAP1AP78559 2803 aaPredicted RBP0.88□□□□□ -2.27
YBX3-214ENST00000544501 FANCMQ8IYD8 2048 aa0.88□□□□□ -2.27
YBX3-214ENST00000544501 ARAP2Q8WZ64 1704 aa0.87□□□□□ -2.27
YBX3-214ENST00000544501 ASXL3Q9C0F0 2248 aa0.87□□□□□ -2.27
YBX3-214ENST00000544501 IGKV1D-37A0A075B6S9 117 aa0.87□□□□□ -2.27
YBX3-214ENST00000544501 CTLA4P16410 223 aa0.87□□□□□ -2.27
YBX3-214ENST00000544501 KRTAP12-1P59990 96 aa0.87□□□□□ -2.27
YBX3-214ENST00000544501 DSTNP60981 165 aa0.87□□□□□ -2.27
YBX3-214ENST00000544501 CASP8Q14790 479 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms