RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PRF1P14222 555 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 MRPL54Q6P161 138 aaKnown RBP11.05□□□□□ -0.64
CHD4-211ENST00000544484 RAMP1O60894 148 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 ORM1P02763 201 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 RFPL3SP0C7P2 107 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 Q1RN00 199 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 OR1L1Q8NH94 360 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 CHAC2Q8WUX2 184 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 TMEM255AQ5JRV8 349 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 SIGIRRQ6IA17 410 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 OR5R1Q8NH85 324 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 COL8A1P27658 744 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 HNRNPA3P51991 378 aaKnown RBP11.05□□□□□ -0.64
CHD4-211ENST00000544484 NPAS1Q99742 590 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 PRO1933Q9H354 126 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 RABAC1Q9UI14 185 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 TNFSF18Q9UNG2 199 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 BMPR1BO00238 502 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 SEMA7AO75326 666 aa11.05□□□□□ -0.64
CHD4-211ENST00000544484 CYB5R3P00387 301 aaPredicted RBP11.05□□□□□ -0.64
CHD4-211ENST00000544484 TMSB15BA0A087X1C1 80 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 VAX1Q5SQQ9 334 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 PPP1R32Q7Z5V6 425 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 FAM181AQ8N9Y4 354 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 NCOR1O75376 2440 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 XIRP1Q702N8 1843 aaKnown RBP11.04□□□□□ -0.64
CHD4-211ENST00000544484 C7orf66A4D0T2 115 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 NCMAPQ5T1S8 102 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 WNT2BQ93097 391 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 EAF1Q96JC9 268 aaPredicted RBP11.04□□□□□ -0.64
CHD4-211ENST00000544484 C7orf77A4D0Y5 90 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 ISG15P05161 165 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 LINC01590Q5TEZ4 76 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 FDCSPQ8NFU4 85 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 LEAP2Q969E1 77 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 KCNMB2Q9Y691 235 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 USF1P22415 310 aaPredicted RBP11.04□□□□□ -0.64
CHD4-211ENST00000544484 IGLV3-21P80748 117 aaPredicted RBP11.04□□□□□ -0.64
CHD4-211ENST00000544484 F12P00748 615 aaPredicted RBP11.04□□□□□ -0.64
CHD4-211ENST00000544484 CXCL2P19875 107 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 UBE2V2Q15819 145 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 APCDD1LQ8NCL9 501 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 PLXNA1Q9UIW2 1896 aa11.04□□□□□ -0.64
CHD4-211ENST00000544484 RGPD3A6NKT7 1758 aaPredicted RBP11.03□□□□□ -0.64
CHD4-211ENST00000544484 HPRT1P00492 218 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 THY1P04216 161 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 CELA3AP09093 270 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 CTSSP25774 331 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 NPBWR2P48146 333 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 RANP62826 216 aaKnown RBP11.03□□□□□ -0.64
CHD4-211ENST00000544484 KLF14Q8TD94 323 aaPredicted RBP11.03□□□□□ -0.64
CHD4-211ENST00000544484 FBLIM1Q8WUP2 373 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 RSG1Q9BU20 258 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 WNT5BQ9H1J7 359 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 GFRA3O60609 400 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 P01737 135 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 PNRC1Q12796 327 aaPredicted RBP11.03□□□□□ -0.64
CHD4-211ENST00000544484 ANKRD55Q3KP44 614 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 LAIR2Q6ISS4 152 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 HCP5Q6MZN7 132 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 ALX4Q9H161 411 aaPredicted RBP11.03□□□□□ -0.64
CHD4-211ENST00000544484 DLL3Q9NYJ7 618 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 ESPL1Q14674 2120 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 HELTA6NFD8 242 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 SRSF10O75494 262 aaKnown RBP11.03□□□□□ -0.64
CHD4-211ENST00000544484 TMPRSS3P57727 454 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 LRRC75AQ8NAA5 344 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 OR8G5Q8NG78 346 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 FAM216AQ8WUB2 273 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 PERPQ96FX8 193 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 SIGLEC12Q96PQ1 595 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 ZNF253O75346 499 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 CD40P25942 277 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 IQCJQ1A5X6 159 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 CXorf66Q5JRM2 361 aaPredicted RBP11.03□□□□□ -0.64
CHD4-211ENST00000544484 DOLPP1Q86YN1 238 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 GHITMQ9H3K2 345 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 G6PC2Q9NQR9 355 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 TRBV5-7A0A0A0MS05 114 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 H3BQ15 152 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 TGFBR3LH3BV60 316 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 C1orf100Q5SVJ3 147 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 MRPL30Q8TCC3 161 aaKnown RBP11.03□□□□□ -0.64
CHD4-211ENST00000544484 GPR132Q9UNW8 380 aa11.03□□□□□ -0.64
CHD4-211ENST00000544484 PRR19A6NJB7 356 aa11.02□□□□□ -0.64
CHD4-211ENST00000544484 C1QL1O75973 258 aa11.02□□□□□ -0.64
CHD4-211ENST00000544484 CD1BP29016 333 aa11.02□□□□□ -0.64
CHD4-211ENST00000544484 NFAM1Q8NET5 270 aaPredicted RBP11.02□□□□□ -0.64
CHD4-211ENST00000544484 RHOVQ96L33 236 aa11.02□□□□□ -0.64
CHD4-211ENST00000544484 SF3B6Q9Y3B4 125 aaKnown RBP11.02□□□□□ -0.64
CHD4-211ENST00000544484 FAM87AP0C7U9 286 aa11.02□□□□□ -0.64
CHD4-211ENST00000544484 CRISP2P16562 243 aa11.02□□□□□ -0.64
CHD4-211ENST00000544484 CEBPEQ15744 281 aa11.02□□□□□ -0.64
CHD4-211ENST00000544484 CD200R1LQ6Q8B3 271 aa11.02□□□□□ -0.64
CHD4-211ENST00000544484 MRGPRGQ86SM5 289 aa11.02□□□□□ -0.64
CHD4-211ENST00000544484 LDLRAD3Q86YD5 345 aa11.02□□□□□ -0.64
CHD4-211ENST00000544484 LILRB1Q8NHL6 650 aaPredicted RBP11.02□□□□□ -0.64
CHD4-211ENST00000544484 MARS2Q96GW9 593 aaKnown RBP11.02□□□□□ -0.64
CHD4-211ENST00000544484 MFNGO00587 321 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 SFTPCP11686 197 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms