RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 TCRBV5S1A1TA0A578 114 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 SPINK2P20155 84 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 REG1BP48304 166 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 OR1P1Q8NH06 330 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 ZNF418Q8TF45 676 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 CXCL16Q9H2A7 254 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 RECKO95980 971 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 PRF1P14222 555 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 TSPOP30536 169 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 MFAP4P55083 255 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 LSM6P62312 80 aaKnown RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 RAE1P78406 368 aaKnown RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 RELQ04864 619 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 OR2H1Q9GZK4 316 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 MRPL18Q9H0U6 180 aaKnown RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 NTMQ9P121 344 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 YBX2Q9Y2T7 364 aaKnown RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 TRAV39A0A0B4J263 110 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 CTLA4P16410 223 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 ATP6V0CP27449 155 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 KRTCAP3Q53RY4 240 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 C17orf47Q8NEP4 570 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 MRM2Q9UI43 246 aaKnown RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 TMEFF2Q9UIK5 374 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 RBMY1BA6NDE4 496 aaKnown RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 RBMY1EA6NEQ0 496 aaKnown RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 K7N7A8 449 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 RBMY1DP0C7P1 496 aaKnown RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 RBMY1A1P0DJD3 496 aaKnown RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 RBMY1CP0DJD4 496 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 PF4V1P10720 104 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 OTX1P32242 354 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-204ENST00000544246 PRSS12P56730 875 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 TMEM196Q5HYL7 178 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 OR10AG1Q8NH19 301 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 TMEM45BQ96B21 275 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 PARLQ9H300 379 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 CA11O75493 328 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 C10orf128Q5T292 105 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 SPINK14Q6IE38 97 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 CADM4Q8NFZ8 388 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 ZNF714Q96N38 554 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 SMDT1Q9H4I9 107 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 TNFRSF12AQ9NP84 129 aa9.08□□□□□ -0.96
PCDH9-204ENST00000544246 TRGC1P0CF51 173 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 HIST1H1AQ02539 215 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 C1orf53Q5VUE5 145 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 KIR2DL4Q99706 377 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 MRPL16Q9NX20 251 aaKnown RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 SF3B6Q9Y3B4 125 aaKnown RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 PPIAL4EA0A075B759 164 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 PPIAL4DF5H284 164 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 PPIAL4FP0DN26 164 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 MDKP21741 143 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 RPL27AP46776 148 aaKnown RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 OR4D5Q8NGN0 318 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 CT55Q8WUE5 264 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 PPIAL4AQ9Y536 164 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 WDR90Q96KV7 1748 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 LOXHD1Q8IVV2 1947 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 A0A1W2PPE3 182 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 GAPDHP04406 335 aaKnown RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 SOD3P08294 240 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 GPR6P46095 362 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 NOVP48745 357 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 PIGYQ3MUY2 71 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 CD300LDQ6UXZ3 194 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 C9orf62Q8N4C0 152 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 GMPPAQ96IJ6 420 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 METTL1Q9UBP6 276 aaKnown RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 DOCK2Q92608 1830 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 OR2A4O95047 310 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 NDUFB4O95168 129 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 IGLV3-27P01718 113 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 HKR1P10072 659 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 NAT2P11245 290 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 NXPH1P58417 271 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 ZNF324BQ6AW86 544 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 TCF24Q7RTU0 167 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 PGLYRP3Q96LB9 341 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 OR2A7Q96R45 310 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 KLK15Q9H2R5 256 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 MICAL3Q7RTP6 2002 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 RREB1Q92766 1687 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 RGPD3A6NKT7 1758 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 RGPD4Q7Z3J3 1758 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 FCGR3AP08637 254 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 TMEM95Q3KNT9 176 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 ZNF658BQ4V348 819 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-204ENST00000544246 XAF1Q6GPH4 301 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 RARRES2Q99969 163 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 KCNE5Q9UJ90 142 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 TNFSF18Q9UNG2 199 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 CCL27Q9Y4X3 112 aa9.07□□□□□ -0.96
PCDH9-204ENST00000544246 MYH4Q9Y623 1939 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 COL11A2P13942 1736 aaPredicted RBP9.06□□□□□ -0.96
PCDH9-204ENST00000544246 VIRMAQ69YN4 1812 aaKnown RBP9.06□□□□□ -0.96
PCDH9-204ENST00000544246 CXCL10P02778 98 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 ARF6P62330 175 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms