RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ABHD14AQ9BUJ0 271 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 DPM3Q9P2X0 92 aa11.75□□□□□ -0.53
TNFRSF1A-216ENST00000543995 TRBV6-7A0A0A0MS04 114 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 RBBP9O75884 186 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 DIRAS3O95661 229 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 IL3RAP26951 378 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ZNF134P52741 427 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 CT45A1Q5HYN5 189 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 SLC25A48Q6ZT89 311 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 CCDC190Q86UF4 302 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 LINC00311Q8N616 119 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ZNF439Q8NDP4 499 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 CT45A3Q8NHU0 189 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ZNF418Q8TF45 676 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 EDARADDQ8WWZ3 215 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 SNAPC3Q92966 411 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ZNF48Q96MX3 618 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 NECAP2Q9NVZ3 263 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 RDH8Q9NYR8 311 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 KLK11Q9UBX7 282 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 NAV3Q8IVL0 2385 aa11.74□□□□□ -0.53
TNFRSF1A-216ENST00000543995 TEP1Q99973 2627 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 CTDSPLO15194 276 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 PAX6P26367 422 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 RCVRNP35243 200 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 OR3A3P47888 321 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 TAS2R46P59540 309 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ACTBP60709 375 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ACTG1P63261 375 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 DGCR2P98153 550 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 PLA1AQ53H76 456 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 PYDC2Q56P42 97 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 LY6G6FQ5SQ64 297 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 LDLRAD2Q5SZI1 272 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 LYG1Q8N1E2 194 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 OR5AP2Q8NGF4 316 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 RPEQ96AT9 228 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 PARP12Q9H0J9 701 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 PTTG2Q9NZH5 202 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ANAPC10Q9UM13 185 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 RBM7Q9Y580 266 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 V9GYH0 126 aa11.73□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ST8SIA5O15466 376 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 IFNA2P01563 188 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 PMP2P02689 132 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 NAT1P18440 290 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 HLA-DMAP28067 261 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 RAB7AP51149 207 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 CDK10Q15131 360 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 H1FOOQ8IZA3 346 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 OR5H2Q8NGV7 314 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 SMIM4Q8WVI0 70 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 TOMM40LQ969M1 308 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 AJUBAQ96IF1 538 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 SOSTQ9BQB4 213 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 C11orf54Q9H0W9 315 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 EHFQ9NZC4 300 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 MTFP1Q9UDX5 166 aa11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 NSD1Q96L73 2696 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-216ENST00000543995 NFYAP23511 347 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ARHGDIBP52566 201 aa11.71□□□□□ -0.53
TNFRSF1A-216ENST00000543995 BAMBIQ13145 260 aa11.71□□□□□ -0.53
TNFRSF1A-216ENST00000543995 TPTE2P1Q5T6R2 138 aa11.71□□□□□ -0.53
TNFRSF1A-216ENST00000543995 DYNAPQ8N1N2 210 aa11.71□□□□□ -0.53
TNFRSF1A-216ENST00000543995 ZNF736B4DX44 427 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 LY6LH3BQJ8 138 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 J3QRK9 145 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ITGB1BP1O14713 200 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 HSD17B6O14756 317 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TCF21O43680 179 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 OR5H8P0DN80 308 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 PTBP1P26599 531 aaKnown RBP eCLIP11.7□□□□□ -0.541e-7■■■□□ 14.7
TNFRSF1A-216ENST00000543995 FCGR2CP31995 323 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 HRH1P35367 487 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ETV6P41212 452 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 REG1BP48304 166 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 RFX2P48378 723 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 SSBP1Q04837 148 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 DIAPH2-AS1Q14236 149 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 CCDC144NLQ6NUI1 221 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 Q6YL49 198 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 LYSMD2Q8IV50 215 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ABHD14BQ96IU4 210 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 SSX3Q99909 188 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TOLLIPQ9H0E2 274 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 MEGF9Q9H1U4 602 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 IFI27L2Q9H2X8 130 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ABCB10Q9NRK6 738 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 TNFRSF19Q9NS68 423 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 PIPOXQ9P0Z9 390 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 RNF150Q9ULK6 438 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 BTBD17A6NE02 478 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 OOSP1A8MZH6 123 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 RAB29O14966 203 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 HOXA3O43365 443 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 GSTZ1O43708 216 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 OR8U9P0C7N5 309 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 ZNF79Q15937 498 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 LRRC75BQ2VPJ9 315 aa11.7□□□□□ -0.54
TNFRSF1A-216ENST00000543995 LDLRAD3Q86YD5 345 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms