RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 SERPINE3A8MV23 424 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 RGS11O94810 467 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 OR2F2O95006 317 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 FCGR3AP08637 254 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 FAM106CPP0CH98 169 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 BLCAPP62952 87 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 MRPS15P82914 257 aaKnown RBP17.41■□□□□ 0.38
OTUB1-212ENST00000543988 LY6G6FQ5SQ64 297 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 Q6ZS46 218 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 C16orf82Q7Z2V1 217 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 MOB3BQ86TA1 216 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 THNSL2Q86YJ6 484 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 LYG1Q8N1E2 194 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 SLC25A38Q96DW6 304 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 RBM14Q96PK6 669 aaKnown RBP17.41■□□□□ 0.38
OTUB1-212ENST00000543988 OR1A1Q9P1Q5 309 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 ETV7Q9Y603 341 aa17.41■□□□□ 0.38
OTUB1-212ENST00000543988 SCTP09683 121 aa17.4■□□□□ 0.38
OTUB1-212ENST00000543988 SCAND1P57086 179 aa17.4■□□□□ 0.38
OTUB1-212ENST00000543988 OR2AK2Q8NG84 335 aa17.4■□□□□ 0.38
OTUB1-212ENST00000543988 AKR1E2Q96JD6 320 aa17.4■□□□□ 0.38
OTUB1-212ENST00000543988 CITED1Q99966 193 aa17.4■□□□□ 0.38
OTUB1-212ENST00000543988 PRSS22Q9GZN4 317 aa17.4■□□□□ 0.38
OTUB1-212ENST00000543988 IFI27L2Q9H2X8 130 aa17.4■□□□□ 0.38
OTUB1-212ENST00000543988 SLC23A1Q9UHI7 598 aa17.4■□□□□ 0.38
OTUB1-212ENST00000543988 ELF5Q9UKW6 265 aaPredicted RBP17.4■□□□□ 0.38
OTUB1-212ENST00000543988 IGKV1-6A0A0C4DH72 117 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 TRDCB7Z8K6 153 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 IGKV1D-33P01593 117 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 IGKV1-33P01594 117 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 RPS19P39019 145 aaKnown RBP17.39■□□□□ 0.37
OTUB1-212ENST00000543988 NCS1P62166 190 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 HES1Q14469 280 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 HNF4GQ14541 408 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 TGIF2LXQ8IUE1 241 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 ODF3L1Q8IXM7 274 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 IZUMO1Q8IYV9 350 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 MAFIPQ8WZ33 124 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.39■□□□□ 0.37
OTUB1-212ENST00000543988 SERTAD4Q9NUC0 356 aa17.39■□□□□ 0.37
OTUB1-212ENST00000543988 ST8SIA5O15466 376 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 TXNL1O43396 289 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 LANCL1O43813 399 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 SCGNO76038 276 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 AMY1AP04745 511 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 AMY2AP04746 511 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 TMEM11P17152 192 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 ARFRP1Q13795 201 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 HERPUD1Q15011 391 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 TMEM95Q3KNT9 176 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 CDNFQ49AH0 187 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 KLHDC1Q8N7A1 406 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 MRPS26Q9BYN8 205 aaKnown RBP17.38■□□□□ 0.37
OTUB1-212ENST00000543988 ZNF230Q9UIE0 474 aaPredicted RBP17.38■□□□□ 0.37
OTUB1-212ENST00000543988 MOB4Q9Y3A3 225 aa17.38■□□□□ 0.37
OTUB1-212ENST00000543988 TMEM235A6NFC5 223 aa17.37■□□□□ 0.37
OTUB1-212ENST00000543988 SH2D7A6NKC9 451 aaPredicted RBP17.37■□□□□ 0.37
OTUB1-212ENST00000543988 ZNF736B4DX44 427 aaPredicted RBP17.37■□□□□ 0.37
OTUB1-212ENST00000543988 FABP7O15540 132 aa17.37■□□□□ 0.37
OTUB1-212ENST00000543988 HSPA12AO43301 675 aa17.37■□□□□ 0.37
OTUB1-212ENST00000543988 OR3A3P47888 321 aa17.37■□□□□ 0.37
OTUB1-212ENST00000543988 ARL6IP1Q15041 203 aa17.37■□□□□ 0.37
OTUB1-212ENST00000543988 C11orf88Q6PI97 169 aa17.37■□□□□ 0.37
OTUB1-212ENST00000543988 DTX3Q8N9I9 347 aa17.37■□□□□ 0.37
OTUB1-212ENST00000543988 RBMXL1Q96E39 390 aaKnown RBP17.37■□□□□ 0.37
OTUB1-212ENST00000543988 SAA2-SAA4A0A096LPE2 208 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 LPLP06858 475 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 SAA2P0DJI9 122 aaPredicted RBP17.36■□□□□ 0.37
OTUB1-212ENST00000543988 ZBTB25P24278 435 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 TALDO1P37837 337 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 CEACAM6P40199 344 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 SERPINB10P48595 397 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 VBP1P61758 197 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 ABCA11PQ4W5N1 156 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 HACD4Q5VWC8 232 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 CROCCP3Q8IVE0 287 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 OR4A4PQ8NGN8 299 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 SGMS2Q8NHU3 365 aa17.36■□□□□ 0.37
OTUB1-212ENST00000543988 EAF1Q96JC9 268 aaPredicted RBP17.36■□□□□ 0.37
OTUB1-212ENST00000543988 MRPL20Q9BYC9 149 aaKnown RBP17.36■□□□□ 0.37
OTUB1-212ENST00000543988 NAA50Q9GZZ1 169 aaKnown RBP17.36■□□□□ 0.37
OTUB1-212ENST00000543988 M0QZK8 103 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 TMEM127O75204 238 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 GSTP1P09211 210 aaKnown RBP17.35■□□□□ 0.37
OTUB1-212ENST00000543988 VSIG10L2P0DP72 767 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 LSAMPQ13449 338 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 EBI3Q14213 229 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 KIR2DS1Q14954 304 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 IGSF11Q5DX21 431 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 ARSJQ5FYB0 599 aaPredicted RBP17.35■□□□□ 0.37
OTUB1-212ENST00000543988 ZNF833PQ6ZTB9 187 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 Q8N6K4 173 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 NUDCD2Q8WVJ2 157 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 CABLES2Q9BTV7 478 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 C11orf54Q9H0W9 315 aaPredicted RBP17.35■□□□□ 0.37
OTUB1-212ENST00000543988 SPATA2Q9UM82 520 aa17.35■□□□□ 0.37
OTUB1-212ENST00000543988 IGKV1D-8A0A087WSZ0 117 aa17.34■□□□□ 0.37
OTUB1-212ENST00000543988 ITGB1BP1O14713 200 aa17.34■□□□□ 0.37
OTUB1-212ENST00000543988 GABARAPO95166 117 aa17.34■□□□□ 0.37
OTUB1-212ENST00000543988 GSTT2P0CG29 244 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms