RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 PPP1R35Q8TAP8 253 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 BSCL2Q96G97 398 aaPredicted RBP14.29□□□□□ -0.12
PTPRO-209ENST00000543886 C11orf1Q9H5F2 150 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 IGKV1D-17A0A075B6S4 117 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 IGHV3OR15-7A0A075B7D8 119 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 A0A1B0GU03 582 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 SLC25A6P12236 298 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 EWSR1Q01844 656 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTPRO-209ENST00000543886 PAX5Q02548 391 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 NHLH2Q02577 135 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 SPRNQ5BIV9 151 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 WFDC8Q8IUA0 241 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 ZBTB34Q8NCN2 500 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 OR13A1Q8NGR1 328 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 SAT2Q96F10 170 aaPredicted RBP14.29□□□□□ -0.12
PTPRO-209ENST00000543886 NKX6-2Q9C056 277 aaPredicted RBP14.29□□□□□ -0.12
PTPRO-209ENST00000543886 OR2D2Q9H210 308 aa14.29□□□□□ -0.12
PTPRO-209ENST00000543886 RAB19A4D1S5 217 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 SPINT2O43291 252 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 ZNF737O75373 536 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 MED6O75586 246 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 NXPH3O95157 252 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 MMP9P14780 707 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 SSTR5P35346 364 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 AKR1C2P52895 323 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 ID3Q02535 119 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 NUP37Q8NFH4 326 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 GPR146Q96CH1 333 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 SLC25A31Q9H0C2 315 aa14.28□□□□□ -0.12
PTPRO-209ENST00000543886 FAM24AA6NFZ4 105 aa14.27□□□□□ -0.12
PTPRO-209ENST00000543886 NUDT19A8MXV4 375 aa14.27□□□□□ -0.12
PTPRO-209ENST00000543886 TNFSF4P23510 183 aa14.27□□□□□ -0.12
PTPRO-209ENST00000543886 PTAFRP25105 342 aa14.27□□□□□ -0.12
PTPRO-209ENST00000543886 SULT1A2P50226 295 aa14.27□□□□□ -0.12
PTPRO-209ENST00000543886 TNFAIP6P98066 277 aaPredicted RBP14.27□□□□□ -0.12
PTPRO-209ENST00000543886 BPIFCQ8NFQ6 507 aa14.27□□□□□ -0.12
PTPRO-209ENST00000543886 LSM10Q969L4 123 aaKnown RBP14.27□□□□□ -0.12
PTPRO-209ENST00000543886 SNX22Q96L94 193 aa14.27□□□□□ -0.12
PTPRO-209ENST00000543886 TOLLIPQ9H0E2 274 aa14.27□□□□□ -0.12
PTPRO-209ENST00000543886 SEBOXQ9HB31 216 aaPredicted RBP14.27□□□□□ -0.12
PTPRO-209ENST00000543886 WFDC1Q9HC57 220 aa14.27□□□□□ -0.12
PTPRO-209ENST00000543886 LYRM2Q9NU23 88 aaPredicted RBP14.27□□□□□ -0.12
PTPRO-209ENST00000543886 RNF150Q9ULK6 438 aa14.27□□□□□ -0.12
PTPRO-209ENST00000543886 KIAA2026Q5HYC2 2103 aa14.27□□□□□ -0.12
PTPRO-209ENST00000543886 MAP1BP46821 2468 aaKnown RBP14.27□□□□□ -0.13
PTPRO-209ENST00000543886 DSPP15924 2871 aaKnown RBP14.27□□□□□ -0.13
PTPRO-209ENST00000543886 A0A0G2JRQ6 117 aa14.27□□□□□ -0.13
PTPRO-209ENST00000543886 PPP1CCP36873 323 aaKnown RBP14.27□□□□□ -0.13
PTPRO-209ENST00000543886 GATA4P43694 442 aa14.27□□□□□ -0.13
PTPRO-209ENST00000543886 NARS2Q96I59 477 aaKnown RBP14.27□□□□□ -0.13
PTPRO-209ENST00000543886 ARV1Q9H2C2 271 aa14.27□□□□□ -0.13
PTPRO-209ENST00000543886 ESRP2Q9H6T0 727 aaKnown RBP14.27□□□□□ -0.13
PTPRO-209ENST00000543886 MMP26Q9NRE1 261 aa14.27□□□□□ -0.13
PTPRO-209ENST00000543886 JKAMPQ9P055 326 aa14.27□□□□□ -0.13
PTPRO-209ENST00000543886 PRELID3BQ9Y3B1 194 aa14.27□□□□□ -0.13
PTPRO-209ENST00000543886 IGSF23A1L1A6 192 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 MGST3O14880 152 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 IGKV1-39P01597 117 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 IGKV1D-39P04432 117 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 UCNP55089 124 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 SSX8Q7RTT4 187 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 SMIM8Q96KF7 97 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 IL19Q9UHD0 177 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 ODAMA1E959 279 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 PITX3O75364 302 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 LHBP01229 141 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 IGHV1-46P01743 117 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 BLOC1S1P78537 153 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 ZNF585BQ52M93 769 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 ZNF808Q8N4W9 903 aaPredicted RBP14.26□□□□□ -0.13
PTPRO-209ENST00000543886 FAM212BQ9NTI7 297 aaPredicted RBP14.26□□□□□ -0.13
PTPRO-209ENST00000543886 CACNG5Q9UF02 275 aa14.26□□□□□ -0.13
PTPRO-209ENST00000543886 BSNQ9UPA5 3926 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 CHST1O43916 411 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 ADH4P08319 380 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 CATR1Q13166 79 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 MSMO1Q15800 293 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 SWI5Q1ZZU3 235 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 FAM53AQ6NSI3 398 aaPredicted RBP14.25□□□□□ -0.13
PTPRO-209ENST00000543886 IL34Q6ZMJ4 242 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 ZGRF1Q86YA3 2104 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 TMEM252Q8N6L7 170 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 RFESDQ8TAC1 157 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 GINS3Q9BRX5 216 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 DCTN5Q9BTE1 182 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 HRH4Q9H3N8 390 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 RNF7Q9UBF6 113 aa14.25□□□□□ -0.13
PTPRO-209ENST00000543886 IGHV3-43A0A0B4J1X8 118 aa14.24□□□□□ -0.13
PTPRO-209ENST00000543886 MEX3AA1L020 520 aaKnown RBP14.24□□□□□ -0.13
PTPRO-209ENST00000543886 FAM74A7A6NL05 159 aa14.24□□□□□ -0.13
PTPRO-209ENST00000543886 C15orf65H3BRN8 121 aa14.24□□□□□ -0.13
PTPRO-209ENST00000543886 SEC11BP0C7V7 166 aa14.24□□□□□ -0.13
PTPRO-209ENST00000543886 IGHV3-43DP0DP04 118 aa14.24□□□□□ -0.13
PTPRO-209ENST00000543886 OMGP23515 440 aa14.24□□□□□ -0.13
PTPRO-209ENST00000543886 CD80P33681 288 aa14.24□□□□□ -0.13
PTPRO-209ENST00000543886 LPAR6P43657 344 aa14.24□□□□□ -0.13
PTPRO-209ENST00000543886 ASCL1P50553 236 aa14.24□□□□□ -0.13
PTPRO-209ENST00000543886 HTD2P86397 168 aa14.24□□□□□ -0.13
PTPRO-209ENST00000543886 ZNF266Q14584 549 aa14.24□□□□□ -0.13
PTPRO-209ENST00000543886 MST1LQ2TV78 715 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms