RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 TOLLIPQ9H0E2 274 aa17.49■□□□□ 0.39
CDKN3-207ENST00000543789 BANF2Q9H503 90 aa17.49■□□□□ 0.39
CDKN3-207ENST00000543789 JPT1Q9UK76 154 aa17.49■□□□□ 0.39
CDKN3-207ENST00000543789 TRAV8-7A0A075B6U6 113 aa17.48■□□□□ 0.39
CDKN3-207ENST00000543789 UBE2QL1A1L167 161 aa17.48■□□□□ 0.39
CDKN3-207ENST00000543789 PPP1CCP36873 323 aaKnown RBP17.48■□□□□ 0.39
CDKN3-207ENST00000543789 YIF1BQ5BJH7 314 aa17.48■□□□□ 0.39
CDKN3-207ENST00000543789 AWAT2Q6E213 333 aa17.48■□□□□ 0.39
CDKN3-207ENST00000543789 ZNF833PQ6ZTB9 187 aa17.48■□□□□ 0.39
CDKN3-207ENST00000543789 RDH12Q96NR8 316 aa17.48■□□□□ 0.39
CDKN3-207ENST00000543789 CST11Q9H112 138 aa17.48■□□□□ 0.39
CDKN3-207ENST00000543789 YPEL1O60688 119 aa17.47■□□□□ 0.39
CDKN3-207ENST00000543789 WBP4O75554 376 aaKnown RBP17.47■□□□□ 0.39
CDKN3-207ENST00000543789 RGS11O94810 467 aa17.47■□□□□ 0.39
CDKN3-207ENST00000543789 MGMTP16455 207 aa17.47■□□□□ 0.39
CDKN3-207ENST00000543789 OR3A3P47888 321 aa17.47■□□□□ 0.39
CDKN3-207ENST00000543789 HTD2P86397 168 aa17.47■□□□□ 0.39
CDKN3-207ENST00000543789 ECSCRQ19T08 205 aa17.47■□□□□ 0.39
CDKN3-207ENST00000543789 ZNF660Q6AZW8 331 aaPredicted RBP17.47■□□□□ 0.39
CDKN3-207ENST00000543789 DMKNQ6E0U4 476 aaPredicted RBP17.47■□□□□ 0.39
CDKN3-207ENST00000543789 ACSM6Q6P461 480 aa17.47■□□□□ 0.39
CDKN3-207ENST00000543789 C5orf24Q7Z6I8 188 aa17.47■□□□□ 0.39
CDKN3-207ENST00000543789 CDH26Q8IXH8 852 aa17.47■□□□□ 0.39
CDKN3-207ENST00000543789 YPEL2Q96QA6 119 aa17.47■□□□□ 0.39
CDKN3-207ENST00000543789 FAM53CQ9NYF3 392 aa17.47■□□□□ 0.39
CDKN3-207ENST00000543789 FOXA2Q9Y261 457 aaPredicted RBP17.47■□□□□ 0.39
CDKN3-207ENST00000543789 DNAH7Q8WXX0 4024 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 SORL1Q92673 2214 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 A0A1W2PN81 502 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 A0A1W2PPK0 400 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 TRIM64CA6NLI5 447 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 CRTAPO75718 401 aaPredicted RBP17.46■□□□□ 0.39
CDKN3-207ENST00000543789 NDUFA3O95167 84 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 LALBAP00709 142 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 MAS1P04201 325 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 LGALS1P09382 135 aaKnown RBP17.46■□□□□ 0.39
CDKN3-207ENST00000543789 MYL12AP19105 171 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 FSTP19883 344 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 CHRNA7P36544 502 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 RPS11P62280 158 aaKnown RBP eCLIP17.46■□□□□ 0.39
CDKN3-207ENST00000543789 C19orf54Q5BKX5 351 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 LY6G6FQ5SQ64 297 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 SIGIRRQ6IA17 410 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 ARPC1AQ92747 370 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 CITED4Q96RK1 184 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 TPSG1Q9NRR2 321 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 CLEC2DQ9UHP7 191 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 LRRC42Q9Y546 428 aa17.46■□□□□ 0.39
CDKN3-207ENST00000543789 IGHV4OR15-8A0A075B7B6 117 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 A0A087WW49 117 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 TRBV5-7A0A0A0MS05 114 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 IRGMA1A4Y4 181 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 SOX15O60248 233 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 OR8U9P0C7N5 309 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 CRIP2P52943 208 aaPredicted RBP17.45■□□□□ 0.38
CDKN3-207ENST00000543789 NDPQ00604 133 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 TCTEX1D1Q8N7M0 179 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 MRPL30Q8TCC3 161 aaKnown RBP17.45■□□□□ 0.38
CDKN3-207ENST00000543789 CASTOR1Q8WTX7 329 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 GALMQ96C23 342 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 Q96M66 194 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 OR4C12Q96R67 309 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 GAR1Q9NY12 217 aaKnown RBP17.45■□□□□ 0.38
CDKN3-207ENST00000543789 EXOSC1Q9Y3B2 195 aaKnown RBP17.45■□□□□ 0.38
CDKN3-207ENST00000543789 FBXO7Q9Y3I1 522 aa17.45■□□□□ 0.38
CDKN3-207ENST00000543789 SAA2-SAA4A0A096LPE2 208 aa17.44■□□□□ 0.38
CDKN3-207ENST00000543789 LCE6AA0A183 80 aa17.44■□□□□ 0.38
CDKN3-207ENST00000543789 PDCD6O75340 191 aa17.44■□□□□ 0.38
CDKN3-207ENST00000543789 HSPB1P04792 205 aaKnown RBP17.44■□□□□ 0.38
CDKN3-207ENST00000543789 SAA2P0DJI9 122 aaPredicted RBP17.44■□□□□ 0.38
CDKN3-207ENST00000543789 CX3CL1P78423 397 aa17.44■□□□□ 0.38
CDKN3-207ENST00000543789 TMEM267Q0VDI3 215 aaPredicted RBP17.44■□□□□ 0.38
CDKN3-207ENST00000543789 C10orf67Q8IYJ2 551 aa17.44■□□□□ 0.38
CDKN3-207ENST00000543789 ZFP41Q8N8Y5 198 aa17.44■□□□□ 0.38
CDKN3-207ENST00000543789 OR2AK2Q8NG84 335 aa17.44■□□□□ 0.38
CDKN3-207ENST00000543789 CYYR1Q96J86 154 aa17.44■□□□□ 0.38
CDKN3-207ENST00000543789 PGLYRP3Q96LB9 341 aa17.44■□□□□ 0.38
CDKN3-207ENST00000543789 DIMT1Q9UNQ2 313 aaKnown RBP17.44■□□□□ 0.38
CDKN3-207ENST00000543789 NUBP2Q9Y5Y2 271 aa17.44■□□□□ 0.38
CDKN3-207ENST00000543789 A3GALT2U3KPV4 340 aa17.44■□□□□ 0.38
CDKN3-207ENST00000543789 SACSQ9NZJ4 4579 aa17.43■□□□□ 0.38
CDKN3-207ENST00000543789 BAG2O95816 211 aa17.43■□□□□ 0.38
CDKN3-207ENST00000543789 CAPGP40121 348 aa17.43■□□□□ 0.38
CDKN3-207ENST00000543789 ZNF555Q8NEP9 628 aa17.43■□□□□ 0.38
CDKN3-207ENST00000543789 FLYWCH2Q96CP2 140 aaKnown RBP17.43■□□□□ 0.38
CDKN3-207ENST00000543789 OR14A2Q96R54 314 aa17.43■□□□□ 0.38
CDKN3-207ENST00000543789 FBXL15Q9H469 300 aa17.43■□□□□ 0.38
CDKN3-207ENST00000543789 FCN1O00602 326 aa17.42■□□□□ 0.38
CDKN3-207ENST00000543789 RRHO14718 337 aa17.42■□□□□ 0.38
CDKN3-207ENST00000543789 EGR2P11161 476 aaPredicted RBP17.42■□□□□ 0.38
CDKN3-207ENST00000543789 PITPNAQ00169 270 aa17.42■□□□□ 0.38
CDKN3-207ENST00000543789 DOC2BQ14184 412 aa17.42■□□□□ 0.38
CDKN3-207ENST00000543789 PLGLAQ15195 96 aa17.42■□□□□ 0.38
CDKN3-207ENST00000543789 SRSF7Q16629 238 aaKnown RBP eCLIP17.42■□□□□ 0.38
CDKN3-207ENST00000543789 PYHIN1Q6K0P9 492 aa17.42■□□□□ 0.38
CDKN3-207ENST00000543789 FAM71F2Q6NXP2 309 aa17.42■□□□□ 0.38
CDKN3-207ENST00000543789 LYPD6Q86Y78 171 aa17.42■□□□□ 0.38
CDKN3-207ENST00000543789 ABHD5Q8WTS1 349 aa17.42■□□□□ 0.38
CDKN3-207ENST00000543789 TM2D3Q9BRN9 247 aa17.42■□□□□ 0.38
CDKN3-207ENST00000543789 IFI27L2Q9H2X8 130 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms