RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, human

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-229	ENST00000543393	GAB2	Q9UQC2	676 aa		13.89	□□□□□ -0.19
RAP1B-229	ENST00000543393		A0A1W2PP11	408 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	IZUMO1R	A6ND01	250 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	BRI3	O95415	125 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	TRGV3	P03979	118 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	OR3A3	P47888	321 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	SOX2	P48431	317 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	PLGLA	Q15195	96 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	ZNF833P	Q6ZTB9	187 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	ZDHHC13	Q8IUH4	622 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	OR52L2P	Q8NGH6	319 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	S100A13	Q99584	98 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	ISG20L2	Q9H9L3	353 aa	Known RBP	13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	ETAA1	Q9NY74	926 aa		13.88	□□□□□ -0.19
RAP1B-229	ENST00000543393	ANKRD34B	A5PLL1	514 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	MCRIP1	C9JLW8	97 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	TFAP2A	P05549	437 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	ZNF93	P35789	620 aa	Predicted RBP	13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	PPP1CC	P36873	323 aa	Known RBP	13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	SYNJ2BP	P57105	145 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	GNGT1	P63211	74 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	ATP6AP1	Q15904	470 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	TRAT1	Q6PIZ9	186 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	C5orf24	Q7Z6I8	188 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	LHFPL3	Q86UP9	236 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393		Q8N402	240 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	MRPS24	Q96EL2	167 aa	Known RBP	13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	RDH12	Q96NR8	316 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	ALG8	Q9BVK2	526 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	JAM3	Q9BX67	310 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	GABARAPL3	Q9BY60	117 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	TAF9B	Q9HBM6	251 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	RCC2	Q9P258	522 aa	Known RBP	13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	POMP	Q9Y244	141 aa		13.87	□□□□□ -0.19
RAP1B-229	ENST00000543393	KMT2A	Q03164	3969 aa		13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	SAA2-SAA4	A0A096LPE2	208 aa		13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393		E9PI62	339 aa		13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	SAA2	P0DJI9	122 aa	Predicted RBP	13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	GTF2F2	P13984	249 aa		13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	SLC22A6	Q4U2R8	563 aa		13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	FAM131A	Q6UXB0	335 aa		13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	GAPT	Q8N292	157 aa		13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	TMEM106A	Q96A25	262 aa		13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	MRPL48	Q96GC5	212 aa	Known RBP	13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	CLCC1	Q96S66	551 aa		13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	SPACA1	Q9HBV2	294 aa		13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	JPT1	Q9UK76	154 aa		13.86	□□□□□ -0.19
RAP1B-229	ENST00000543393	C13orf42	A0A1B0GVH6	325 aa		13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	ZNF780A	O75290	641 aa	Predicted RBP	13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	CSN3	P07498	182 aa		13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	FST	P19883	344 aa		13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	CD81	P60033	236 aa		13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	DDI2	Q5TDH0	399 aa		13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	SYS1	Q8N2H4	156 aa		13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	RGP1	Q92546	391 aa	Predicted RBP	13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	ST6GALNAC5	Q9BVH7	336 aa		13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	TMEM138	Q9NPI0	162 aa		13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	ZNF355P	Q9NSJ1	428 aa		13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	ADAM30	Q9UKF2	790 aa		13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	EXOG	Q9Y2C4	368 aa	Known RBP	13.85	□□□□□ -0.19
RAP1B-229	ENST00000543393	YPEL1	O60688	119 aa		13.84	□□□□□ -0.19
RAP1B-229	ENST00000543393	SNRPB	P14678	240 aa	Known RBP	13.84	□□□□□ -0.19
RAP1B-229	ENST00000543393	GYS2	P54840	703 aa		13.84	□□□□□ -0.19
RAP1B-229	ENST00000543393	RAB12	Q6IQ22	244 aa		13.84	□□□□□ -0.19
RAP1B-229	ENST00000543393	TRUB1	Q8WWH5	349 aa	Known RBP	13.84	□□□□□ -0.19
RAP1B-229	ENST00000543393	YPEL2	Q96QA6	119 aa		13.84	□□□□□ -0.19
RAP1B-229	ENST00000543393	MBNL3	Q9NUK0	354 aa	Known RBP	13.84	□□□□□ -0.19
RAP1B-229	ENST00000543393	IMPAD1	Q9NX62	359 aa		13.84	□□□□□ -0.19
RAP1B-229	ENST00000543393	SIGLEC8	Q9NYZ4	499 aa		13.84	□□□□□ -0.19
RAP1B-229	ENST00000543393	TPPP	O94811	219 aa		13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	CNIH1	O95406	144 aa		13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	FADS2	O95864	444 aa	Known RBP	13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	MOGAT2	Q3SYC2	334 aa		13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	ZNF562	Q6V9R5	426 aa		13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	AMIGO2	Q86SJ2	522 aa		13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	DEFB125	Q8N687	156 aa		13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	LGALS12	Q96DT0	336 aa		13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	CYYR1	Q96J86	154 aa		13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	MYCBP	Q99417	103 aa	Predicted RBP	13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	NEURL2	Q9BR09	285 aa		13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	KCNIP1	Q9NZI2	227 aa		13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393	PEX16	Q9Y5Y5	336 aa		13.83	□□□□□ -0.2
RAP1B-229	ENST00000543393		A0A0G2JLM5	398 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	CA11	O75493	328 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	SC5D	O75845	299 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	CA2	P00918	260 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	MAS1	P04201	325 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	CD2	P06729	351 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	GSTP1	P09211	210 aa	Known RBP	13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	CT45A6	P0DMU7	189 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	CT45A5	P0DMU8	189 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	CT45A7	P0DMV0	189 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	BDKRB2	P30411	391 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	PPP3R1	P63098	170 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	HTD2	P86397	168 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	MRPL28	Q13084	256 aa	Known RBP	13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	LY6G6F	Q5SQ64	297 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	SLC25A30	Q5SVS4	291 aa		13.82	□□□□□ -0.2
RAP1B-229	ENST00000543393	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.82	□□□□□ -0.2

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