RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 KIAA1549Q9HCM3 1950 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 A0A1W2PR80 420 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 B4E171 279 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 TRAPPC2LH3BP13 241 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 SCGB1D1O95968 90 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 TSPAN7P41732 249 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 CARD18P57730 90 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 RAC3P60763 192 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 IQCJQ1A5X6 159 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 TEX38Q6PEX7 206 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.17■□□□□ 0.82
SHD-201ENST00000543264 YRDCQ86U90 279 aaKnown RBP20.17■□□□□ 0.82
SHD-201ENST00000543264 MYPOPQ86VE0 399 aaPredicted RBP20.17■□□□□ 0.82
SHD-201ENST00000543264 IGKV1-5P01602 117 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 IGHV3-9P01782 118 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 PCBD1P61457 104 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 ACTL10Q5JWF8 245 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 PLA2G3Q9NZ20 509 aa20.17■□□□□ 0.82
SHD-201ENST00000543264 PCOLCEQ15113 449 aa20.16■□□□□ 0.82
SHD-201ENST00000543264 SLC38A11Q08AI6 406 aa20.16■□□□□ 0.82
SHD-201ENST00000543264 MKXQ8IYA7 352 aa20.16■□□□□ 0.82
SHD-201ENST00000543264 ZNF488Q96MN9 340 aa20.16■□□□□ 0.82
SHD-201ENST00000543264 OR6C3Q9NZP0 311 aa20.16■□□□□ 0.82
SHD-201ENST00000543264 SOX15O60248 233 aa20.15■□□□□ 0.82
SHD-201ENST00000543264 CCL2P13500 99 aa20.15■□□□□ 0.82
SHD-201ENST00000543264 SLC23A3Q6PIS1 610 aa20.15■□□□□ 0.82
SHD-201ENST00000543264 SPSB4Q96A44 273 aa20.15■□□□□ 0.82
SHD-201ENST00000543264 C1QTNF5Q9BXJ0 243 aa20.15■□□□□ 0.82
SHD-201ENST00000543264 OR1A1Q9P1Q5 309 aa20.15■□□□□ 0.82
SHD-201ENST00000543264 TMEM250H0YL14 139 aa20.15■□□□□ 0.82
SHD-201ENST00000543264 GALR2O43603 387 aaPredicted RBP20.15■□□□□ 0.82
SHD-201ENST00000543264 SYNGR1O43759 233 aa20.15■□□□□ 0.82
SHD-201ENST00000543264 CXCL13O43927 109 aa20.15■□□□□ 0.82
SHD-201ENST00000543264 GYPAP02724 150 aa20.15■□□□□ 0.82
SHD-201ENST00000543264 ACOT6Q3I5F7 207 aaPredicted RBP20.15■□□□□ 0.82
SHD-201ENST00000543264 ZDHHC23Q8IYP9 409 aa20.15■□□□□ 0.82
SHD-201ENST00000543264 LSM10Q969L4 123 aaKnown RBP20.15■□□□□ 0.82
SHD-201ENST00000543264 TRAV39A0A0B4J263 110 aa20.14■□□□□ 0.82
SHD-201ENST00000543264 ZNF716A6NP11 495 aa20.14■□□□□ 0.82
SHD-201ENST00000543264 CCKARP32238 428 aa20.14■□□□□ 0.82
SHD-201ENST00000543264 ACSM6Q6P461 480 aa20.14■□□□□ 0.82
SHD-201ENST00000543264 PRR18Q8N4B5 295 aa20.14■□□□□ 0.82
SHD-201ENST00000543264 CADM4Q8NFZ8 388 aa20.14■□□□□ 0.82
SHD-201ENST00000543264 OR10V1Q8NGI7 309 aa20.14■□□□□ 0.82
SHD-201ENST00000543264 PSMF1Q92530 271 aa20.14■□□□□ 0.82
SHD-201ENST00000543264 GPR35Q9HC97 309 aa20.14■□□□□ 0.82
SHD-201ENST00000543264 RBM7Q9Y580 266 aaKnown RBP20.14■□□□□ 0.82
SHD-201ENST00000543264 ANAPC16Q96DE5 110 aa20.14■□□□□ 0.81
SHD-201ENST00000543264 FKBP11Q9NYL4 201 aa20.14■□□□□ 0.81
SHD-201ENST00000543264 GJE1A6NN92 205 aa20.13■□□□□ 0.81
SHD-201ENST00000543264 M0R143 59 aa20.13■□□□□ 0.81
SHD-201ENST00000543264 ERVFC1-1P60608 527 aa20.13■□□□□ 0.81
SHD-201ENST00000543264 CBR3O75828 277 aa20.13■□□□□ 0.81
SHD-201ENST00000543264 CHRNA7P36544 502 aa20.13■□□□□ 0.81
SHD-201ENST00000543264 CNN1P51911 297 aaKnown RBP20.13■□□□□ 0.81
SHD-201ENST00000543264 DOCK11Q5JSL3 2073 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 PIGBOS1A0A0B4J2F0 54 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 TOX3O15405 576 aaPredicted RBP20.12■□□□□ 0.81
SHD-201ENST00000543264 GDF9O60383 454 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 GGCTO75223 188 aaKnown RBP20.12■□□□□ 0.81
SHD-201ENST00000543264 COX5BP10606 129 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 SSR4P51571 173 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 GBGT1Q8N5D6 347 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 CISD2Q8N5K1 135 aaKnown RBP20.12■□□□□ 0.81
SHD-201ENST00000543264 UBALD1Q8TB05 177 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 SGCZQ96LD1 299 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 A0A1B0GWJ7 208 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 CLDN1O95832 211 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 HOXA6P31267 233 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 PRDM14Q9GZV8 571 aa20.12■□□□□ 0.81
SHD-201ENST00000543264 HLA-BQ31612 363 aa20.11■□□□□ 0.81
SHD-201ENST00000543264 CEACAM21Q3KPI0 293 aa20.11■□□□□ 0.81
SHD-201ENST00000543264 ZNF585BQ52M93 769 aa20.11■□□□□ 0.81
SHD-201ENST00000543264 C9orf135Q5VTT2 229 aa20.11■□□□□ 0.81
SHD-201ENST00000543264 SAXO1Q8IYX7 474 aa20.11■□□□□ 0.81
SHD-201ENST00000543264 REPIN1Q9BWE0 567 aaKnown RBP20.11■□□□□ 0.81
SHD-201ENST00000543264 RIMS4Q9H426 269 aaPredicted RBP20.11■□□□□ 0.81
SHD-201ENST00000543264 KCNS2Q9ULS6 477 aa20.11■□□□□ 0.81
SHD-201ENST00000543264 A0A1B0GUS0 222 aa20.11■□□□□ 0.81
SHD-201ENST00000543264 IGLV2-14P01704 120 aa20.11■□□□□ 0.81
SHD-201ENST00000543264 ZNF25P17030 456 aaPredicted RBP20.11■□□□□ 0.81
SHD-201ENST00000543264 MRPL14Q6P1L8 145 aaKnown RBP20.11■□□□□ 0.81
SHD-201ENST00000543264 GUSBP11Q6P575 273 aa20.11■□□□□ 0.81
SHD-201ENST00000543264 OR10G9Q8NGN4 311 aa20.11■□□□□ 0.81
SHD-201ENST00000543264 OR10G7Q8NGN6 311 aa20.11■□□□□ 0.81
SHD-201ENST00000543264 AURKAIP1Q9NWT8 199 aaPredicted RBP20.11■□□□□ 0.81
SHD-201ENST00000543264 A0A1W2PQM1 296 aa20.1■□□□□ 0.81
SHD-201ENST00000543264 PAGE4O60829 102 aa20.1■□□□□ 0.81
SHD-201ENST00000543264 CCL7P80098 99 aa20.1■□□□□ 0.81
SHD-201ENST00000543264 PMP22Q01453 160 aa20.1■□□□□ 0.81
SHD-201ENST00000543264 FAM78BQ5VT40 261 aa20.1■□□□□ 0.81
SHD-201ENST00000543264 SMRP1Q8NCR6 262 aa20.1■□□□□ 0.81
SHD-201ENST00000543264 IGHV5-10-1A0A0J9YXX1 117 aa20.1■□□□□ 0.81
SHD-201ENST00000543264 CTXND1A0A1B0GTU2 59 aa20.1■□□□□ 0.81
SHD-201ENST00000543264 SRP14P37108 136 aaKnown RBP20.1■□□□□ 0.81
SHD-201ENST00000543264 MRPL21Q7Z2W9 205 aaKnown RBP20.1■□□□□ 0.81
SHD-201ENST00000543264 TMEM9BQ9NQ34 198 aa20.1■□□□□ 0.81
SHD-201ENST00000543264 POLR3KQ9Y2Y1 108 aaPredicted RBP20.1■□□□□ 0.81
SHD-201ENST00000543264 TRAV24A0A0B4J272 114 aa20.09■□□□□ 0.81
SHD-201ENST00000543264 WDR1O75083 606 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms