RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SAT2Q96F10 170 aaPredicted RBP11.81□□□□□ -0.52
LDB3-207ENST00000542786 SNX22Q96L94 193 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 MAGT1Q9H0U3 335 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 LYRM2Q9NU23 88 aaPredicted RBP11.81□□□□□ -0.52
LDB3-207ENST00000542786 LIN7CQ9NUP9 197 aaKnown RBP11.81□□□□□ -0.52
LDB3-207ENST00000542786 RAXQ9Y2V3 346 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 MAP1BP46821 2468 aaKnown RBP11.81□□□□□ -0.52
LDB3-207ENST00000542786 TLN1Q9Y490 2541 aaKnown RBP11.81□□□□□ -0.52
LDB3-207ENST00000542786 PIEZO2Q9H5I5 2752 aa11.81□□□□□ -0.52
LDB3-207ENST00000542786 PIGBOS1A0A0B4J2F0 54 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 ODAMA1E959 279 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 FAM24AA6NFZ4 105 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 K7N7A8 449 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 SSSCA1O60232 199 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 ADH4P08319 380 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 CGB3P0DN86 165 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 CGB7P0DN87 165 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 PTAFRP25105 342 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 LPAR6P43657 344 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 BRWD1-AS2P59051 145 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 RPL30P62888 115 aaKnown RBP11.8□□□□□ -0.52
LDB3-207ENST00000542786 HTD2P86397 168 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 IZUMO4Q1ZYL8 232 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 TRAT1Q6PIZ9 186 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 TMEM108Q6UXF1 575 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 NCOR1P1Q9H4R4 102 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 GCM1Q9NP62 436 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 IL19Q9UHD0 177 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 SH3BGRL2Q9UJC5 107 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 NUP50Q9UKX7 468 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 BSNQ9UPA5 3926 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 MGST3O14880 152 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 CD80P33681 288 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 TNFAIP6P98066 277 aaPredicted RBP11.8□□□□□ -0.52
LDB3-207ENST00000542786 FAM201AQ5SY85 155 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 STUMQ69YW2 141 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 EIF5AL1Q6IS14 154 aaKnown RBP11.8□□□□□ -0.52
LDB3-207ENST00000542786 WFDC8Q8IUA0 241 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 TMEM252Q8N6L7 170 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 BOLLQ8N9W6 283 aaKnown RBP11.8□□□□□ -0.52
LDB3-207ENST00000542786 BPIFCQ8NFQ6 507 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 ARL11Q969Q4 196 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 AGMATQ9BSE5 352 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 OR2D2Q9H210 308 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 PLEKHF2Q9H8W4 249 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 TAS2R3Q9NYW6 316 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 ATMQ13315 3056 aa11.8□□□□□ -0.52
LDB3-207ENST00000542786 ZNF705EA8MWA4 302 aaPredicted RBP11.79□□□□□ -0.52
LDB3-207ENST00000542786 CRYZL1O95825 349 aa11.79□□□□□ -0.52
LDB3-207ENST00000542786 UCNP55089 124 aa11.79□□□□□ -0.52
LDB3-207ENST00000542786 BSPH1Q075Z2 132 aa11.79□□□□□ -0.52
LDB3-207ENST00000542786 ADIPOQQ15848 244 aa11.79□□□□□ -0.52
LDB3-207ENST00000542786 UQCC3Q6UW78 93 aa11.79□□□□□ -0.52
LDB3-207ENST00000542786 SSX8Q7RTT4 187 aa11.79□□□□□ -0.52
LDB3-207ENST00000542786 KDF1Q8NAX2 398 aaPredicted RBP11.79□□□□□ -0.52
LDB3-207ENST00000542786 SDSLQ96GA7 329 aa11.79□□□□□ -0.52
LDB3-207ENST00000542786 RNF7Q9UBF6 113 aa11.79□□□□□ -0.52
LDB3-207ENST00000542786 RNF150Q9ULK6 438 aa11.79□□□□□ -0.52
LDB3-207ENST00000542786 RNF212BA8MTL3 300 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 ABCD4O14678 606 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 CHST1O43916 411 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 CD55P08174 381 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 SEC11BP0C7V7 166 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 SPP1P10451 314 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 EPHA1P21709 976 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 EDDM3AQ14507 147 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 BTNL8Q6UX41 500 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 LYPD6BQ8NI32 183 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 VKORC1Q9BQB6 163 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 ESRP2Q9H6T0 727 aaKnown RBP11.78□□□□□ -0.52
LDB3-207ENST00000542786 MMP26Q9NRE1 261 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 CACNG5Q9UF02 275 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 RBM7Q9Y580 266 aaKnown RBP11.78□□□□□ -0.52
LDB3-207ENST00000542786 IGF2RP11717 2491 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 BORCS7-ASMTA0A0B4J1R7 106 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 NUDT19A8MXV4 375 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 F2RL2O00254 374 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 FBXO24O75426 580 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 SELLP14151 372 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 PVALBP20472 110 aaPredicted RBP11.78□□□□□ -0.52
LDB3-207ENST00000542786 LOXL3P58215 753 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 SELENOVP59797 346 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 PXDC1Q5TGL8 231 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 TGIF2LYQ8IUE0 185 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 ZNRF1Q8ND25 227 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 RFESDQ8TAC1 157 aa11.78□□□□□ -0.52
LDB3-207ENST00000542786 FAM212BQ9NTI7 297 aaPredicted RBP11.78□□□□□ -0.52
LDB3-207ENST00000542786 IGHV3-43A0A0B4J1X8 118 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 MEX3AA1L020 520 aaKnown RBP11.77□□□□□ -0.53
LDB3-207ENST00000542786 SPINT2O43291 252 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 RAMP3O60896 148 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 PROP1O75360 226 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 IGHV3-43DP0DP04 118 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 ASCL1P50553 236 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 SWI5Q1ZZU3 235 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 IL34Q6ZMJ4 242 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 FAM216AQ8WUB2 273 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 RND1Q92730 232 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 WFIKKN1Q96NZ8 548 aa11.77□□□□□ -0.53
LDB3-207ENST00000542786 PARP11Q9NR21 331 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms