RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SIRPB1O00241 398 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 CA6P23280 308 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 UCP1P25874 307 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 IL24Q13007 206 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 CXorf67Q86X51 503 aaPredicted RBP13.05□□□□□ -0.32
CNOT9-208ENST00000542068 FAM185AQ8N0U4 392 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 RCC1LQ96I51 464 aaKnown RBP13.05□□□□□ -0.32
CNOT9-208ENST00000542068 OR14J1Q9UGF5 321 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 ZFHX4Q86UP3 3567 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 HEATR1Q9H583 2144 aaKnown RBP13.04□□□□□ -0.32
CNOT9-208ENST00000542068 IFNL4K9M1U5 179 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 HIST1H1BP16401 226 aaKnown RBP13.04□□□□□ -0.32
CNOT9-208ENST00000542068 HOXA4Q00056 320 aaPredicted RBP13.04□□□□□ -0.32
CNOT9-208ENST00000542068 FAM53AQ6NSI3 398 aaPredicted RBP13.04□□□□□ -0.32
CNOT9-208ENST00000542068 SLC35E3Q7Z769 313 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 LHX4Q969G2 390 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 A0A1B0GW64 132 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 A0A1W2PPQ1 181 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 TNFSF15O95150 251 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 NDUFB7P17568 137 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 DMRTC2Q8IXT2 367 aaPredicted RBP13.04□□□□□ -0.32
CNOT9-208ENST00000542068 ELOVL1Q9BW60 279 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 OPA3Q9H6K4 179 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 PRSS50Q9UI38 385 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 RNF115Q9Y4L5 304 aa13.04□□□□□ -0.32
CNOT9-208ENST00000542068 MAP1LC3B2A6NCE7 125 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 C9orf172C9J069 976 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 GALR2O43603 387 aaPredicted RBP13.03□□□□□ -0.32
CNOT9-208ENST00000542068 RBMXL2O75526 392 aaKnown RBP13.03□□□□□ -0.32
CNOT9-208ENST00000542068 PTBP3O95758 552 aaKnown RBP13.03□□□□□ -0.32
CNOT9-208ENST00000542068 CLDN1O95832 211 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 SNRPCP09234 159 aaKnown RBP13.03□□□□□ -0.32
CNOT9-208ENST00000542068 S100GP29377 79 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 SNIP1Q8TAD8 396 aaKnown RBP13.03□□□□□ -0.32
CNOT9-208ENST00000542068 HIST1H2BLQ99880 126 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 MAP1LC3BQ9GZQ8 125 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 SLC39A9Q9NUM3 307 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 LAMA5O15230 3695 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 ZNF503-AS2A6NEH8 195 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 SOX15O60248 233 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 RHBDL1O75783 438 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 DFFBO76075 338 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 DDTP30046 118 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 IDH3GP51553 393 aaPredicted RBP13.03□□□□□ -0.32
CNOT9-208ENST00000542068 ARG2P78540 354 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 TSTD3H0UI37 97 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 EGR1P18146 543 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 IL2RGP31785 369 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 BAXQ07812 192 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 OR8B8Q15620 311 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 C16orf82Q7Z2V1 217 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 NUFIP2Q7Z417 695 aaKnown RBP13.03□□□□□ -0.32
CNOT9-208ENST00000542068 ZNF808Q8N4W9 903 aaPredicted RBP13.03□□□□□ -0.32
CNOT9-208ENST00000542068 TMEM251Q8N6I4 163 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 OR4C12Q96R67 309 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 TTTY12Q9BZ98 90 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 SMDT1Q9H4I9 107 aa13.03□□□□□ -0.32
CNOT9-208ENST00000542068 MED12LQ86YW9 2145 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 A0A087WWC5 75 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 KIR2DS1A0A191URI9 304 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 SYNGR2O43760 224 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 ZNF737O75373 536 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 GRPP07492 148 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 KIR2DS4P43632 304 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 KIR2DS1Q14954 304 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 PRSS8Q16651 343 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 ZNF295-AS1Q8N0V1 137 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 CNEP1R1Q8N9A8 125 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 OR4X1Q8NH49 305 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 SIRT7Q9NRC8 400 aa13.02□□□□□ -0.32
CNOT9-208ENST00000542068 MAS1LP35410 378 aa13.02□□□□□ -0.33
CNOT9-208ENST00000542068 APLNRP35414 380 aa13.02□□□□□ -0.33
CNOT9-208ENST00000542068 FGF12P61328 243 aa13.02□□□□□ -0.33
CNOT9-208ENST00000542068 P2RY6Q15077 328 aa13.02□□□□□ -0.33
CNOT9-208ENST00000542068 DCAF10Q5QP82 559 aa13.02□□□□□ -0.33
CNOT9-208ENST00000542068 FAM173AQ9BQD7 235 aa13.02□□□□□ -0.33
CNOT9-208ENST00000542068 KIAA1324LA8MWY0 1029 aaPredicted RBP13.01□□□□□ -0.33
CNOT9-208ENST00000542068 NEURL1O76050 574 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 IGHEP01854 428 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 COL10A1Q03692 680 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 NCR3LG1Q68D85 454 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 ZNF66Q6ZN08 573 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 Q6ZSR3 168 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 PLPPR2Q96GM1 343 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 PLSCR2Q9NRY7 297 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 ATP23Q9Y6H3 246 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 A0A1B0GU03 582 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 ANKRD30BLA7E2S9 258 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 NAPSAO96009 420 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 CYB5R3P00387 301 aaPredicted RBP13.01□□□□□ -0.33
CNOT9-208ENST00000542068 KRASP01116 189 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 MMP7P09237 267 aaPredicted RBP13.01□□□□□ -0.33
CNOT9-208ENST00000542068 MDH2P40926 338 aaKnown RBP13.01□□□□□ -0.33
CNOT9-208ENST00000542068 CA5BP1Q8WTZ4 195 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 ADGRG7Q96K78 797 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 PCGF1Q9BSM1 259 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 TRAPPC2LQ9UL33 140 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 FZR1Q9UM11 496 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 OR2W1Q9Y3N9 320 aa13.01□□□□□ -0.33
CNOT9-208ENST00000542068 NCKAP5O14513 1909 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms