RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ERGP11308 486 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 PRKACGP22612 351 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 GRPRP30550 384 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 CHRNB4P30926 498 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 S100A11P31949 105 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 KIR2DS2P43631 304 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 PPICP45877 212 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 RPL29P47914 159 aaKnown RBP4.38□□□□□ -1.71
DDB1-219ENST00000541513 DVL1P1P54792 670 aaPredicted RBP4.38□□□□□ -1.71
DDB1-219ENST00000541513 BAXQ07812 192 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 GINS1Q14691 196 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 CDK10Q15131 360 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 TCTEX1D4Q5JR98 221 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 PAGE3Q5JUK9 113 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 SAMD13Q5VXD3 122 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 WDR74Q6RFH5 385 aaPredicted RBP4.38□□□□□ -1.71
DDB1-219ENST00000541513 PLET1Q6UQ28 207 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 TMEM205Q6UW68 189 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 SBSNQ6UWP8 590 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 ZNF767PQ75MW2 155 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 CROCCP2Q86T23 111 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 P2RY8Q86VZ1 359 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 EIF4E3Q8N5X7 224 aaKnown RBP4.38□□□□□ -1.71
DDB1-219ENST00000541513 SLC26A10Q8NG04 563 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 OR52E2Q8NGJ4 325 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 OR4C13Q8NGP0 309 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 OR10G6Q8NH81 332 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 SFT2D1Q8WV19 159 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 EEF1AKMT1Q8WVE0 214 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 TNFAIP8L1Q8WVP5 186 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 TMED6Q8WW62 240 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 TMEM230Q96A57 120 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 CPNE2Q96FN4 548 aaPredicted RBP4.38□□□□□ -1.71
DDB1-219ENST00000541513 ARHGDIGQ99819 225 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 FAM206AQ9NX38 181 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 ZNF223Q9UK11 482 aaPredicted RBP4.38□□□□□ -1.71
DDB1-219ENST00000541513 ZNF257Q9Y2Q1 563 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 ACACBO00763 2458 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 IGF2RP11717 2491 aa4.38□□□□□ -1.71
DDB1-219ENST00000541513 URB1O60287 2271 aaKnown RBP4.37□□□□□ -1.71
DDB1-219ENST00000541513 SPAARA0A1B0GVQ0 90 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 IGSF23A1L1A6 192 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 LINC00862A6NCI5 91 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 CLDN24A6NM45 220 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 K7EQG2 157 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 GPR31O00270 319 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 SLC17A2O00624 439 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 TP53I11O14683 189 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 PDE6DO43924 150 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 SOX14O95416 240 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 IGF2P01344 180 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 C1QCP02747 245 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 CT45A10P0DMU9 189 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 NELFEP18615 380 aaKnown RBP4.37□□□□□ -1.71
DDB1-219ENST00000541513 OMGP23515 440 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 MPGP29372 298 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 DDTP30046 118 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 RPL12P30050 165 aaKnown RBP4.37□□□□□ -1.71
DDB1-219ENST00000541513 FMO3P31513 532 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 PAX9P55771 341 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 RAB25P57735 213 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 PKIAP61925 76 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 SLC35A1P78382 337 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 MXD1Q05195 221 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 ZNF616Q08AN1 781 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 ARHGAP11BQ3KRB8 267 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 HSD17B12Q53GQ0 312 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 WDR38Q5JTN6 314 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 FAM71E1Q6IPT2 247 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 SLC18B1Q6NT16 456 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 UFSP1Q6NVU6 142 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 OOSP2Q86WS3 158 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 RAB42Q8N4Z0 105 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 OR51G1Q8NGK1 321 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 OR4S2Q8NH73 311 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 OR51E1Q8TCB6 317 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 LCN9Q8WX39 176 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 ZNF300Q96RE9 604 aaPredicted RBP4.37□□□□□ -1.71
DDB1-219ENST00000541513 DOK1Q99704 481 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 MS4A6AQ9H2W1 248 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 SRMSQ9H3Y6 488 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 RNF167Q9H6Y7 350 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 AMBNQ9NP70 447 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 CALYQ9NYX4 217 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 VPS29Q9UBQ0 182 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 GNG8Q9UK08 70 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 SLC35A3Q9Y2D2 325 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 UFC1Q9Y3C8 167 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 SDK2Q58EX2 2172 aa4.37□□□□□ -1.71
DDB1-219ENST00000541513 SCN3AQ9NY46 2000 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 FRYQ5TBA9 3013 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 CENPVL3A0A0U1RRI6 287 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 DAPL1A0PJW8 107 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 TLCD2A6NGC4 264 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 TRAPPC2LH3BP13 241 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 H3BQF6 201 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 SLC17A3O00476 420 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 IFNA1P01562 189 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 C1QBP02746 253 aa4.36□□□□□ -1.71
DDB1-219ENST00000541513 MAKP20794 623 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms