RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 Q6ZPA2 131 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 TMED4Q7Z7H5 227 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 LRRC75A-AS1Q8N1F1 130 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 OR52L2PQ8NGH6 319 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 CLDND2Q8NHS1 167 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 MARCH1Q8TCQ1 289 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 C10orf105Q8TEF2 133 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 GIMAP1Q8WWP7 306 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 TOMM40LQ969M1 308 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 CREB3L1Q96BA8 519 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 ANAPC16Q96DE5 110 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 ZNF714Q96N38 554 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 FOXC2Q99958 501 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 SSBP3Q9BWW4 388 aaPredicted RBP5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 BEX2Q9BXY8 128 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 KRTAP4-2Q9BYR5 136 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 C20orf85Q9H1P6 137 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 BEX1Q9HBH7 125 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 TAS2R3Q9NYW6 316 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 CALYQ9NYX4 217 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 OR1A1Q9P1Q5 309 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 ONECUT1Q9UBC0 465 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 OPN4Q9UHM6 478 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 ITGB1BP2Q9UKP3 347 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 C14orf166Q9Y224 244 aaKnown RBP5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 UBE2J1Q9Y385 318 aaPredicted RBP5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 LINC00312Q9Y6C7 94 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 VPS13CQ709C8 3753 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 USF3Q68DE3 2245 aa5.48□□□□□ -1.53
CLTCL1-206ENST00000540896 CHD3Q12873 2000 aaKnown RBP5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 IGHV4-30-2A0A087WSY4 118 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 IGKV1-6A0A0C4DH72 117 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 OR5H14A6NHG9 310 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 C15orf65H3BRN8 121 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 PEX14O75381 377 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 PPYP01298 95 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 IGHV2-5P01817 119 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 LIPFP07098 398 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 OR8U9P0C7N5 309 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 SLC25A16P16260 332 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 CCL3L1P16619 93 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 AKR1C4P17516 323 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 FPR2P25090 351 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 S100GP29377 79 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 ECI1P42126 302 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 LUMP51884 338 aaPredicted RBP5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 LCN2P80188 198 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 HTD2P86397 168 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 HERPUD1Q15011 391 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 CR1LQ2VPA4 569 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 TMEM30BQ3MIR4 351 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 C4orf46Q504U0 113 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 Q5PR19 223 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 PRAMEF5Q5TYX0 476 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 LPCAT3Q6P1A2 487 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 ZNF841Q6ZN19 808 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 Q6ZNX1 250 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 ZDHHC22Q8N966 263 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 OR2AK2Q8NG84 335 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 OR10V1Q8NGI7 309 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 OR13C8Q8NGS7 320 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 OR8U1Q8NH10 309 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 ZFAND1Q8TCF1 268 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 RNF141Q8WVD5 230 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 SECTM1Q8WVN6 248 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 CORO2AQ92828 525 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 CABLES2Q9BTV7 478 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 SLC5A7Q9GZV3 580 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 SLC2A8Q9NY64 477 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 RDH8Q9NYR8 311 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 IDI2-AS1Q9NZ38 188 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 RPUSD1Q9UJJ7 312 aaKnown RBP5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 RNF150Q9ULK6 438 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 KCNS2Q9ULS6 477 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 FLVCR2Q9UPI3 526 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 OR2W1Q9Y3N9 320 aa5.47□□□□□ -1.53
CLTCL1-206ENST00000540896 ARID1AO14497 2285 aa5.46□□□□□ -1.53
CLTCL1-206ENST00000540896 MED13LQ71F56 2210 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 NPIPB11E5RHQ5 1161 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 F5H0A9 414 aaPredicted RBP5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 F2RL2O00254 374 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 HSD17B6O14756 317 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 SMAD7O15105 426 aaKnown RBP5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 ENSAO43768 121 aaKnown RBP5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 FOXH1O75593 365 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 FCN3O75636 299 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 IGHV3-7P01780 117 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 CGB3P0DN86 165 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 CGB7P0DN87 165 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 PI3P19957 117 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 ANXA7P20073 488 aaKnown RBP5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 USF1P22415 310 aaPredicted RBP5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 PPP1CCP36873 323 aaKnown RBP5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 LMO4P61968 165 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 BAMBIQ13145 260 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 CBX3Q13185 183 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF273Q14593 569 aa5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 SURF2Q15527 256 aaPredicted RBP5.46□□□□□ -1.54
CLTCL1-206ENST00000540896 C17orf58Q2M2W7 97 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms