RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 PSMB3P49720 205 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 AP1S1P61966 158 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 PSPHP78330 225 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 ELOCQ15369 112 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 MPPED2Q15777 294 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 MPV17L2Q567V2 206 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 AKR1C8PQ5T2L2 129 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 SBSNQ6UWP8 590 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 TOMM20LQ6UXN7 152 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 ZBTB8OSQ8IWT0 167 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 TMEM75Q8N9X5 138 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 LINC01555Q8NAE3 123 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 C20orf203Q8NBC4 194 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 ZNF555Q8NEP9 628 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 OR11H6Q8NGC7 330 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 OR2T4Q8NH00 348 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 GNPDA2Q8TDQ7 276 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 SLC25A44Q96H78 314 aaPredicted RBP3.85□□□□□ -1.79
PRKDC-209ENST00000540819 OR2M2Q96R28 347 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 GGTLC1Q9BX51 225 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 NOX3Q9HBY0 568 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 TAS2R1Q9NYW7 299 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 PCYT1BQ9Y5K3 369 aaPredicted RBP3.85□□□□□ -1.79
PRKDC-209ENST00000540819 MYO5BQ9ULV0 1848 aa3.85□□□□□ -1.79
PRKDC-209ENST00000540819 IGHV1OR15-9A0A0B4J2B8 117 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 IGHV3-66A0A0C4DH42 116 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 MAP1LC3B2A6NCE7 125 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 MFSD11O43934 449 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 C1QBP02746 253 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 OR10J4P0C629 311 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 CCL1P22362 96 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 HSPA9P38646 679 aaKnown RBP3.84□□□□□ -1.79
PRKDC-209ENST00000540819 CXCL5P42830 114 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 CDC42P60953 191 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 TMEM128Q5BJH2 165 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 TMEM205Q6UW68 189 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 C5orf46Q6UWT4 87 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 GOLT1AQ6ZVE7 132 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 FA2HQ7L5A8 372 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 SLC16A13Q7RTY0 426 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 EIF4E3Q8N5X7 224 aaKnown RBP3.84□□□□□ -1.79
PRKDC-209ENST00000540819 C14orf178Q8N769 122 aaPredicted RBP3.84□□□□□ -1.79
PRKDC-209ENST00000540819 ZNF645Q8N7E2 425 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 GRPEL2Q8TAA5 225 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 LZICQ8WZA0 190 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 APOBEC3DQ96AK3 386 aaPredicted RBP3.84□□□□□ -1.79
PRKDC-209ENST00000540819 GALMQ96C23 342 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 MAP1LC3BQ9GZQ8 125 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 RNASE7Q9H1E1 156 aaKnown RBP3.84□□□□□ -1.79
PRKDC-209ENST00000540819 SH3BGRL3Q9H299 93 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 FAM96AQ9H5X1 160 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 LYRM2Q9NU23 88 aaPredicted RBP3.84□□□□□ -1.79
PRKDC-209ENST00000540819 GSKIPQ9P0R6 139 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 SS18L2Q9UHA2 77 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 PRNDQ9UKY0 176 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 PLCH2O75038 1416 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 ATRNO75882 1429 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 DCCP43146 1447 aa3.84□□□□□ -1.79
PRKDC-209ENST00000540819 TRIP11Q15643 1979 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 TRAV26-2A0A0B4J265 109 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 ZNF850A8MQ14 1090 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 INMT-MINDY4F8WBC2 141 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 H7C423 109 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 EIF1BO60739 113 aaKnown RBP3.83□□□□□ -1.8
PRKDC-209ENST00000540819 ZNF354AO60765 605 aaPredicted RBP3.83□□□□□ -1.8
PRKDC-209ENST00000540819 IGHV3-11P01762 117 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 SERPINE1P05121 402 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 P0C879 139 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 S100A1P23297 94 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 EIF1P41567 113 aaKnown RBP3.83□□□□□ -1.8
PRKDC-209ENST00000540819 LYZP61626 148 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 SNRPD2P62316 118 aaKnown RBP3.83□□□□□ -1.8
PRKDC-209ENST00000540819 IL15RAQ13261 267 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 SLC25A29Q8N8R3 303 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 OR2M3Q8NG83 312 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 OR8B12Q8NGG6 310 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 OR5H2Q8NGV7 314 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 FAM57AQ8TBR7 257 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 CT55Q8WUE5 264 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 C15orf40Q8WUR7 153 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 TSC22D3Q99576 134 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 DEFB126Q9BYW3 111 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 GTSF1LQ9H1H1 148 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 OR52D1Q9H346 318 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 PARVBQ9HBI1 364 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 LRTM1Q9HBL6 345 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 PRTFDC1Q9NRG1 225 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 UQCC1Q9NVA1 299 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 TAC3Q9UHF0 121 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 ZNF706Q9Y5V0 76 aaPredicted RBP3.83□□□□□ -1.8
PRKDC-209ENST00000540819 PXMP4Q9Y6I8 212 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 CARMIL3Q8ND23 1372 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 ERCC6Q03468 1493 aa3.83□□□□□ -1.8
PRKDC-209ENST00000540819 SETD5Q9C0A6 1442 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 RTL1A6NKG5 1358 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 DHX57Q6P158 1386 aaKnown RBP3.82□□□□□ -1.8
PRKDC-209ENST00000540819 LOC102724200A0A096LPH7 203 aaPredicted RBP3.82□□□□□ -1.8
PRKDC-209ENST00000540819 IGKV6-21A0A0C4DH24 114 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 OR5H1A6NKK0 313 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms