RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 HOXA4Q00056 320 aaPredicted RBP11.56□□□□□ -0.56
RTN3-210ENST00000540798 OOEPA6NGQ2 149 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 GFRA3O60609 400 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 MED6O75586 246 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 CEACAM6P40199 344 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 SRSF3P84103 164 aaKnown RBP11.56□□□□□ -0.56
RTN3-210ENST00000540798 MSMO1Q15800 293 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 SMIM21Q3B7S5 101 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 GPR146Q96CH1 333 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 PLEKHF2Q9H8W4 249 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 TMEM50AO95807 157 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 ADCYAP1P18509 176 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 PVALBP20472 110 aaPredicted RBP11.55□□□□□ -0.56
RTN3-210ENST00000540798 ZNF83P51522 516 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 CAV2P51636 162 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 TDGF1P3P51864 188 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 ZNF585BQ52M93 769 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 FAM90A1Q86YD7 464 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 BIN3Q9NQY0 253 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 IGLV3-9A0A075B6K5 115 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 FAM24AA6NFZ4 105 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 A6NLC8 198 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 GPR37O15354 613 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 FBXO24O75426 580 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 GLRXP35754 106 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 GPX4P36969 197 aaPredicted RBP11.55□□□□□ -0.56
RTN3-210ENST00000540798 PAX9P55771 341 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 SNRPEP62304 92 aaKnown RBP11.55□□□□□ -0.56
RTN3-210ENST00000540798 LRP11Q86VZ4 500 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 PRR18Q8N4B5 295 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 DRAM1Q8N682 238 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 OR51H1Q8NH63 302 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 KCNIP1Q9NZI2 227 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 METRNQ9UJH8 293 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 ARID1AO14497 2285 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 SRRM5B3KS81 715 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 MKRN2OSH3BPM6 223 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 SSSCA1O60232 199 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 DANCRP0C864 163 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 COL10A1Q03692 680 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 AESQ08117 197 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 ZNF295-AS1Q8N0V1 137 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 TMEM252Q8N6L7 170 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 CD177Q8N6Q3 437 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 OR1L1Q8NH94 360 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 RHOVQ96L33 236 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 LURAP1Q96LR2 239 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 LIN7CQ9NUP9 197 aaKnown RBP11.55□□□□□ -0.56
RTN3-210ENST00000540798 UFSP2Q9NUQ7 469 aa11.55□□□□□ -0.56
RTN3-210ENST00000540798 M0R1B8 84 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 HSPA12AO43301 675 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 SERPINE2P07093 398 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 NDUFB7P17568 137 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 ZNF645Q8N7E2 425 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 ZBTB34Q8NCN2 500 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 GALMQ96C23 342 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 TSNAXQ99598 290 aaKnown RBP11.54□□□□□ -0.56
RTN3-210ENST00000540798 ZNF251Q9BRH9 671 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 SLC25A31Q9H0C2 315 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 FAM212BQ9NTI7 297 aaPredicted RBP11.54□□□□□ -0.56
RTN3-210ENST00000540798 CARHSP1Q9Y2V2 147 aaKnown RBP11.54□□□□□ -0.56
RTN3-210ENST00000540798 SPTBN4Q9H254 2564 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 BOD1L1Q8NFC6 3051 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 A8MXE2 369 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 F2RL1P55085 397 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 BAXQ07812 192 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 FAM180AQ6UWF9 173 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 UBALD1Q8TB05 177 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 LRRC29Q8WV35 223 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 C5orf30Q96GV9 206 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 LUZP4Q9P127 313 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 PPP1R3CQ9UQK1 317 aa11.54□□□□□ -0.56
RTN3-210ENST00000540798 HEATR1Q9H583 2144 aaKnown RBP11.54□□□□□ -0.56
RTN3-210ENST00000540798 TXNL1O43396 289 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 ZNF737O75373 536 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 IGKV1-5P01602 117 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 HBZP02008 142 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 OR8U9P0C7N5 309 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 SFTPCP11686 197 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 EGR1P18146 543 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 PCP4P48539 62 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 OR2Z1Q8NG97 314 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 OR8U1Q8NH10 309 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 TMEM171Q8WVE6 324 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 NKX6-2Q9C056 277 aaPredicted RBP11.53□□□□□ -0.56
RTN3-210ENST00000540798 MAGT1Q9H0U3 335 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 HRH4Q9H3N8 390 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 IGHV2-70P01814 119 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 TFF1P04155 84 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 Q6ZRG5 221 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 Q6ZRM9 215 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 SPAG16Q8N0X2 631 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 CRYAAP02489 173 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 CD5P06127 495 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 RELQ04864 619 aaPredicted RBP11.53□□□□□ -0.56
RTN3-210ENST00000540798 STX12Q86Y82 276 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 Q8NA96 180 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 MUCL1Q96DR8 90 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 ABHD17AQ96GS6 310 aa11.53□□□□□ -0.56
RTN3-210ENST00000540798 RNF212BA8MTL3 300 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms