RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SUB1P53999 127 aaKnown RBP eCLIP11.21□□□□□ -0.612e-11■■■■■ 90.2
DNMT1-203ENST00000540357 RNPS1Q15287 305 aaKnown RBP11.21□□□□□ -0.61
DNMT1-203ENST00000540357 C9orf50Q5SZB4 431 aa11.21□□□□□ -0.61
DNMT1-203ENST00000540357 STARD4Q96DR4 205 aa11.21□□□□□ -0.61
DNMT1-203ENST00000540357 TRIB1Q96RU8 372 aa11.21□□□□□ -0.61
DNMT1-203ENST00000540357 WDR61Q9GZS3 305 aaKnown RBP11.21□□□□□ -0.61
DNMT1-203ENST00000540357 TINAGQ9UJW2 476 aa11.21□□□□□ -0.61
DNMT1-203ENST00000540357 OOEPA6NGQ2 149 aa11.21□□□□□ -0.61
DNMT1-203ENST00000540357 ZNF253O75346 499 aa11.21□□□□□ -0.61
DNMT1-203ENST00000540357 BPIFB3P59826 476 aa11.21□□□□□ -0.61
DNMT1-203ENST00000540357 CCL20P78556 96 aa11.21□□□□□ -0.61
DNMT1-203ENST00000540357 SMIM15Q7Z3B0 74 aa11.21□□□□□ -0.61
DNMT1-203ENST00000540357 A0A0J9YW62 118 aa11.21□□□□□ -0.62
DNMT1-203ENST00000540357 G6PCP35575 357 aa11.21□□□□□ -0.62
DNMT1-203ENST00000540357 LRRC75BQ2VPJ9 315 aa11.21□□□□□ -0.62
DNMT1-203ENST00000540357 GUSBP11Q6P575 273 aa11.21□□□□□ -0.62
DNMT1-203ENST00000540357 OR4X1Q8NH49 305 aa11.21□□□□□ -0.62
DNMT1-203ENST00000540357 FAM173AQ9BQD7 235 aa11.21□□□□□ -0.62
DNMT1-203ENST00000540357 SSUH2Q9Y2M2 353 aa11.21□□□□□ -0.62
DNMT1-203ENST00000540357 TRBV24-1A0A075B6N3 115 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 IGHV3-64DA0A0J9YX35 117 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 LNP1A1A4G5 178 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 C9JQL5 133 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 SCGB2A1O75556 95 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 GPX4P36969 197 aaPredicted RBP11.2□□□□□ -0.62
DNMT1-203ENST00000540357 MPLP40238 635 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 HIST1H2BLQ99880 126 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 ANAPC10Q9UM13 185 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 FCGR3BO75015 233 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 CLPSP04118 112 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 CSRP1P21291 193 aaKnown RBP11.2□□□□□ -0.62
DNMT1-203ENST00000540357 SPINK9Q5DT21 86 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 BTNL3Q6UXE8 466 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 LINC00696Q6ZRV3 163 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 R3HDM4Q96D70 268 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 ABHD14AQ9BUJ0 271 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 EGLN1Q9GZT9 426 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 PSG11Q9UQ72 335 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 SNURFLB1AK76 121 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 DIRC3C9JPN6 131 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 NDUFS6O75380 124 aaKnown RBP11.2□□□□□ -0.62
DNMT1-203ENST00000540357 BRS3P32247 399 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 HSPB9Q9BQS6 159 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 WDR54Q9H977 334 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 KNL1Q8NG31 2342 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 SHISA7A6NL88 538 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 M0R1X1 148 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 MPDU1O75352 247 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 IGHV2-5P01817 119 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 MT-ND6P03923 174 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 CLN8Q9UBY8 286 aa11.2□□□□□ -0.62
DNMT1-203ENST00000540357 SOD3P08294 240 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 NDUFB7P17568 137 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 IER3P46695 156 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 ZNF552Q9H707 407 aaPredicted RBP11.19□□□□□ -0.62
DNMT1-203ENST00000540357 MSL2Q9HCI7 577 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 FRMPD3Q5JV73 1810 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 CHEK1O14757 476 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 NDUFB4O95168 129 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 TRA2AQ13595 282 aaKnown RBP eCLIP11.19□□□□□ -0.623e-8■■■■■ 29.7
DNMT1-203ENST00000540357 S100A7AQ86SG5 101 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 TMEM170AQ8WVE7 144 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 TRAV1-1A0A0B4J248 108 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 CT45A6P0DMU7 189 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 CT45A5P0DMU8 189 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 CT45A7P0DMV0 189 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 CT45A1Q5HYN5 189 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 CT45A3Q8NHU0 189 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 LYZL4Q96KX0 146 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 HSD17B10Q99714 261 aaKnown RBP11.19□□□□□ -0.62
DNMT1-203ENST00000540357 PHF7Q9BWX1 381 aaPredicted RBP11.19□□□□□ -0.62
DNMT1-203ENST00000540357 PRDM14Q9GZV8 571 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 KLF13Q9Y2Y9 288 aaPredicted RBP11.19□□□□□ -0.62
DNMT1-203ENST00000540357 SPINK4O60575 86 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 CD1BP29016 333 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 ZNF441Q8N8Z8 693 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 POM121L2Q96KW2 1035 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 ZNF319Q9P2F9 582 aa11.19□□□□□ -0.62
DNMT1-203ENST00000540357 THSD7BQ9C0I4 1608 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 TRAV34A0A0B4J273 112 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 OR10J4P0C629 311 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 CEACAM1P13688 526 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 SHISA5Q8N114 240 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 SPEM1Q8N4L4 309 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 AURKAIP1Q9NWT8 199 aaPredicted RBP11.18□□□□□ -0.62
DNMT1-203ENST00000540357 TCF21O43680 179 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 LBX1P52954 281 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 FOXL2P58012 376 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 FER1L6-AS2Q96M78 137 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 GPHA2Q96T91 129 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 ELOVL1Q9BW60 279 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 CBY3A6NI87 242 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 ERHP84090 104 aaKnown RBP11.18□□□□□ -0.62
DNMT1-203ENST00000540357 TNFRSF9Q07011 255 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 FGFRL1Q8N441 504 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 TMEM178AQ8NBL3 297 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 C14orf144Q96I85 54 aa11.18□□□□□ -0.62
DNMT1-203ENST00000540357 TP53BP1Q12888 1972 aaPredicted RBP11.18□□□□□ -0.62
DNMT1-203ENST00000540357 ATG2BQ96BY7 2078 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms