RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 FAM58AQ8N1B3 248 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 PECRQ9BY49 303 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 WIPI2Q9Y4P8 454 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 SDK2Q58EX2 2172 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 NKX2-6A6NCS4 301 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 C17orf51A8MQB3 221 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 G3V3Y1 287 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 K7ERU9 68 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 TOX4O94842 621 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 CFPP27918 469 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 RND2P52198 227 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 UCP3P55916 312 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 MTCP1P56278 107 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 SOX8P57073 446 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 ZNF90Q03938 601 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 BAXQ07812 192 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 PRTGQ2VWP7 1150 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 GBGT1Q8N5D6 347 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 OR4B1Q8NGF8 309 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 BOD1Q96IK1 185 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 CISD1Q9NZ45 108 aaKnown RBP7.5□□□□□ -1.21
DDB1-217ENST00000540166 UQCR10Q9UDW1 63 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 RFNGQ9Y644 331 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 CD300LBA8K4G0 201 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 NPIPA2E9PIF3 369 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 NPIPA3F8WFD2 350 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 ADAM20O43506 726 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 TNFSF13O75888 250 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 ISG15P05161 165 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 UMODP07911 640 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 GABRA2P47869 451 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 UCP2P55851 309 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 MSMO1Q15800 293 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 OR56B2PQ8NGI1 322 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 SARAFQ96BY9 339 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 NUDT16L1Q9BRJ7 211 aaKnown RBP7.5□□□□□ -1.21
DDB1-217ENST00000540166 MED12Q93074 2177 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 CDS2O95674 445 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 GDF1P27539 372 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 MMDQ15546 238 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 KISS1Q15726 138 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 PRR27Q6MZM9 219 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 DOK3Q7L591 496 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 RCC1LQ96I51 464 aaKnown RBP7.49□□□□□ -1.21
DDB1-217ENST00000540166 P2RX4Q99571 388 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 MRPS18CQ9Y3D5 142 aaKnown RBP7.49□□□□□ -1.21
DDB1-217ENST00000540166 CHD3Q12873 2000 aaKnown RBP7.49□□□□□ -1.21
DDB1-217ENST00000540166 FAM90A27PA6NNH2 459 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 A8MXE2 369 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 DIRC3C9JPN6 131 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 TGFBR3LH3BV60 316 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 FOXS1O43638 330 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 CHST1O43916 411 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 FUT7Q11130 342 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 ZNF468Q5VIY5 522 aaPredicted RBP7.49□□□□□ -1.21
DDB1-217ENST00000540166 C5orf24Q7Z6I8 188 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 OR10S1Q8NGN2 331 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 OR1L6Q8NGR2 347 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 PINX1Q96BK5 328 aaKnown RBP7.49□□□□□ -1.21
DDB1-217ENST00000540166 MOB3AQ96BX8 217 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 SLC35D1Q9NTN3 355 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 AQP7P3A6NL99 342 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 TRAF3IP2O43734 574 aaPredicted RBP7.49□□□□□ -1.21
DDB1-217ENST00000540166 OR2J2O76002 312 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 DBHP09172 617 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 PMCHP20382 165 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 NTF3P20783 257 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 MALLQ13021 153 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 SPATA45Q537H7 98 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.49□□□□□ -1.21
DDB1-217ENST00000540166 MOB1AQ9H8S9 216 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 MANBALQ9NQG1 85 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 TMEM106BQ9NUM4 274 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 CLDN16Q9Y5I7 305 aa7.49□□□□□ -1.21
DDB1-217ENST00000540166 PIGBOS1A0A0B4J2F0 54 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 C3orf85A0A1B0GTC6 90 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 CIDEAO60543 219 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 TTRP02766 147 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 HLA-DOBP13765 273 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 AMTP48728 403 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 TMEM50BP56557 158 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 UBE2G2P60604 165 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 TMEM267Q0VDI3 215 aaPredicted RBP7.48□□□□□ -1.21
DDB1-217ENST00000540166 KRTCAP3Q53RY4 240 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 SPSB3Q6PJ21 355 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 H1FNTQ75WM6 255 aaPredicted RBP7.48□□□□□ -1.21
DDB1-217ENST00000540166 RTN4RL2Q86UN3 420 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 MYPOPQ86VE0 399 aaPredicted RBP7.48□□□□□ -1.21
DDB1-217ENST00000540166 LHFPL1Q86WI0 220 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 MRPL30Q8TCC3 161 aaKnown RBP7.48□□□□□ -1.21
DDB1-217ENST00000540166 HDHD3Q9BSH5 251 aaPredicted RBP7.48□□□□□ -1.21
DDB1-217ENST00000540166 NCOR1P1Q9H4R4 102 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 OR6C3Q9NZP0 311 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 ICE1Q9Y2F5 2266 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 IGSF23A1L1A6 192 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 GRIFINA4D1Z8 144 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 ZNF814B7Z6K7 855 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 DTYMKP23919 212 aa7.48□□□□□ -1.21
DDB1-217ENST00000540166 SRP14P37108 136 aaKnown RBP7.48□□□□□ -1.21
DDB1-217ENST00000540166 DCAF7P61962 342 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms