RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 GALNT11Q8NCW6 608 aa18.67■□□□□ 0.58
HOMER3-204ENST00000539827 OR5D13Q8NGL4 314 aa18.67■□□□□ 0.58
HOMER3-204ENST00000539827 TOLLIPQ9H0E2 274 aa18.67■□□□□ 0.58
HOMER3-204ENST00000539827 AUP1Q9Y679 476 aa18.67■□□□□ 0.58
HOMER3-204ENST00000539827 B9A039 149 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 MBPP02686 304 aaPredicted RBP18.66■□□□□ 0.58
HOMER3-204ENST00000539827 PET100P0DJ07 73 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 ZNF16P17020 682 aaPredicted RBP18.66■□□□□ 0.58
HOMER3-204ENST00000539827 GZMHP20718 246 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 TFF3Q07654 80 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 SLC51BQ86UW2 128 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 CCL17Q92583 94 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 CITED4Q96RK1 184 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 OR2D2Q9H210 308 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 NBEAQ8NFP9 2946 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 SPDEFO95238 335 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 GNLYP22749 145 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 FGFRL1Q8N441 504 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 ZNF808Q8N4W9 903 aaPredicted RBP18.66■□□□□ 0.58
HOMER3-204ENST00000539827 MS4A5Q9H3V2 200 aa18.66■□□□□ 0.58
HOMER3-204ENST00000539827 TMEM178BH3BS89 294 aa18.65■□□□□ 0.58
HOMER3-204ENST00000539827 LGALS8O00214 317 aa18.65■□□□□ 0.58
HOMER3-204ENST00000539827 LOXP28300 417 aaPredicted RBP18.65■□□□□ 0.58
HOMER3-204ENST00000539827 NUP62P37198 522 aaPredicted RBP18.65■□□□□ 0.58
HOMER3-204ENST00000539827 SMCO1Q147U7 214 aa18.65■□□□□ 0.58
HOMER3-204ENST00000539827 ZNF645Q8N7E2 425 aa18.65■□□□□ 0.58
HOMER3-204ENST00000539827 RBPMSQ93062 196 aaKnown RBP18.65■□□□□ 0.58
HOMER3-204ENST00000539827 C14orf79Q96F83 325 aa18.65■□□□□ 0.58
HOMER3-204ENST00000539827 C5orf30Q96GV9 206 aa18.65■□□□□ 0.58
HOMER3-204ENST00000539827 K7EPK0 472 aa18.64■□□□□ 0.58
HOMER3-204ENST00000539827 ADAM20O43506 726 aa18.64■□□□□ 0.58
HOMER3-204ENST00000539827 DEDDO75618 318 aa18.64■□□□□ 0.58
HOMER3-204ENST00000539827 RLN2P04090 185 aa18.64■□□□□ 0.58
HOMER3-204ENST00000539827 HTD2P86397 168 aa18.64■□□□□ 0.58
HOMER3-204ENST00000539827 CR1LQ2VPA4 569 aa18.64■□□□□ 0.58
HOMER3-204ENST00000539827 ALKAL2Q6UX46 152 aa18.64■□□□□ 0.58
HOMER3-204ENST00000539827 FAM71E2Q8N5Q1 922 aa18.64■□□□□ 0.58
HOMER3-204ENST00000539827 TMEM106BQ9NUM4 274 aa18.64■□□□□ 0.58
HOMER3-204ENST00000539827 ITPR1Q14643 2758 aa18.64■□□□□ 0.57
HOMER3-204ENST00000539827 ZNF672Q499Z4 452 aaPredicted RBP18.64■□□□□ 0.57
HOMER3-204ENST00000539827 OR4D5Q8NGN0 318 aa18.64■□□□□ 0.57
HOMER3-204ENST00000539827 ZNF471Q9BX82 626 aaPredicted RBP18.64■□□□□ 0.57
HOMER3-204ENST00000539827 OR6C3Q9NZP0 311 aa18.64■□□□□ 0.57
HOMER3-204ENST00000539827 ARID1AO14497 2285 aa18.64■□□□□ 0.57
HOMER3-204ENST00000539827 PPIAL4EA0A075B759 164 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 TRAV38-1A0A0B4J264 116 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 LEUTXA8MZ59 168 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 PPIAL4DF5H284 164 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 SIGLEC5O15389 551 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 ST8SIA5O15466 376 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 SERPINE2P07093 398 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 PPIAL4FP0DN26 164 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 OMGP23515 440 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 C1orf87Q8N0U7 546 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 ST8SIA2Q92186 375 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 IL22RA2Q969J5 263 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 MARVELD3Q96A59 401 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 ARPC5LQ9BPX5 153 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 CALYQ9NYX4 217 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 PPIAL4AQ9Y536 164 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 PKDREJQ9NTG1 2253 aa18.63■□□□□ 0.57
HOMER3-204ENST00000539827 NKX6-3A6NJ46 265 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 B3GALNT1O75752 331 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 WNT2P09544 360 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 UBA52P62987 128 aaKnown RBP18.62■□□□□ 0.57
HOMER3-204ENST00000539827 SWI5Q1ZZU3 235 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 MUC15Q8N387 334 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 ABHD14BQ96IU4 210 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 GNG12Q9UBI6 72 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 PSG11Q9UQ72 335 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 EPG5Q9HCE0 2579 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 USP24Q9UPU5 2620 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 DUXBA0A1W2PPF3 345 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 RPS10-NUDT3A0A1W2PQS6 291 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 F5H0A9 414 aaPredicted RBP18.62■□□□□ 0.57
HOMER3-204ENST00000539827 TMPRSS2O15393 492 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 ZG16O60844 167 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 C17orf58Q2M2W7 97 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 AQP10Q96PS8 301 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 FAM234AQ9H0X4 552 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 NCOR1P1Q9H4R4 102 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 PLEKHF2Q9H8W4 249 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 HCFC1P51610 2035 aa18.62■□□□□ 0.57
HOMER3-204ENST00000539827 IGKV1-39P01597 117 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 IGHV3-7P01780 117 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 IGKV1D-39P04432 117 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 CGB3P0DN86 165 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 CGB7P0DN87 165 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 HKR1P10072 659 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 VDAC1P21796 283 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 C4orf17Q53FE4 359 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 NMSQ5H8A3 153 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 BTNL3Q6UXE8 466 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 ZBTB34Q8NCN2 500 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 GSX2Q9BZM3 304 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 RCL1Q9Y2P8 373 aaKnown RBP18.61■□□□□ 0.57
HOMER3-204ENST00000539827 ARFGEF3Q5TH69 2177 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 PKD1L2Q7Z442 2459 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 A0A0G2JRQ6 117 aa18.61■□□□□ 0.57
HOMER3-204ENST00000539827 NDUFB7P17568 137 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms