RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 OCSTAMPQ9BR26 566 aa5.88□□□□□ -1.47
LMO3-220ENST00000539232 ZCCHC4Q9H5U6 513 aa5.88□□□□□ -1.47
LMO3-220ENST00000539232 INPP5EQ9NRR6 644 aa5.88□□□□□ -1.47
LMO3-220ENST00000539232 ZFP57Q9NU63 452 aa5.88□□□□□ -1.47
LMO3-220ENST00000539232 C1RLQ9NZP8 487 aa5.88□□□□□ -1.47
LMO3-220ENST00000539232 ZNRD1Q9P1U0 126 aa5.88□□□□□ -1.47
LMO3-220ENST00000539232 CARHSP1Q9Y2V2 147 aaKnown RBP5.88□□□□□ -1.47
LMO3-220ENST00000539232 A0A1W2PP11 408 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 TMEM218A2RU14 115 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 TMEM212A6NML5 194 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 G3V3Q6 166 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 CLDN34H7C241 214 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 M0R1W7 72 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 GABRPO00591 440 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 GPR137BO60478 399 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 CREBL2O60519 120 aaPredicted RBP5.87□□□□□ -1.47
LMO3-220ENST00000539232 GATBO75879 557 aaKnown RBP5.87□□□□□ -1.47
LMO3-220ENST00000539232 KDM4BO94953 1096 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 OR2H2O95918 312 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 IFNA10P01566 189 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 RLN2P04090 185 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 HKR1P10072 659 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 CXCL3P19876 107 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 IER3P46695 156 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 OR3A4PP47883 348 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 GLIPR1P48060 266 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 ATP1B3P54709 279 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 MXD1Q05195 221 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 KISS1Q15726 138 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 PIGYQ3MUY2 71 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 FAM53AQ6NSI3 398 aaPredicted RBP5.87□□□□□ -1.47
LMO3-220ENST00000539232 RBMS3Q6XE24 437 aaKnown RBP5.87□□□□□ -1.47
LMO3-220ENST00000539232 C1orf122Q6ZSJ8 110 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 TMUB2Q71RG4 321 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 RTN4RL2Q86UN3 420 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 ZNF561Q8N587 486 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 KIR3DL3Q8N743 410 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 DNAAF1Q8NEP3 725 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 RNASE11Q8TAA1 199 aaKnown RBP5.87□□□□□ -1.47
LMO3-220ENST00000539232 PPP1R35Q8TAP8 253 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 PIFOQ8TCI5 191 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 TSEN15Q8WW01 171 aaKnown RBP5.87□□□□□ -1.47
LMO3-220ENST00000539232 EMG1Q92979 244 aaKnown RBP5.87□□□□□ -1.47
LMO3-220ENST00000539232 COQ2Q96H96 371 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 JMJD8Q96S16 334 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 ALX4Q9H161 411 aaPredicted RBP5.87□□□□□ -1.47
LMO3-220ENST00000539232 UNKLQ9H9P5 680 aaKnown RBP5.87□□□□□ -1.47
LMO3-220ENST00000539232 ABRACLQ9P1F3 81 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 METTL1Q9UBP6 276 aaKnown RBP5.87□□□□□ -1.47
LMO3-220ENST00000539232 DHDHQ9UQ10 334 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 POLDIP2Q9Y2S7 368 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 SIGLEC9Q9Y336 463 aa5.87□□□□□ -1.47
LMO3-220ENST00000539232 TRBV5-7A0A0A0MS05 114 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 TRBV23-1A0A0A0MS06 115 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 TRAV24A0A0B4J272 114 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 TRBV5-5A0A0J9YX44 114 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 C17orf98A8MV24 154 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 DISC1C4P0D8 188 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 GPR37O15354 613 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 CHST1O43916 411 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 CLN5O75503 358 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 EIF3GO75821 320 aaKnown RBP eCLIP5.86□□□□□ -1.47
LMO3-220ENST00000539232 TMEM225BP0DP42 221 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 IGFBP3P17936 291 aaPredicted RBP5.86□□□□□ -1.47
LMO3-220ENST00000539232 ELK1P19419 428 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 RAB4AP20338 218 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 GABRR1P24046 479 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 UBE2E1P51965 193 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 EDDM3BP56851 147 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 FABP5Q01469 135 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 DEFA5Q01523 94 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 AESQ08117 197 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 ZNF345Q14585 488 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 ZNF146Q15072 292 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 CNN3Q15417 329 aaKnown RBP5.86□□□□□ -1.47
LMO3-220ENST00000539232 NKAPLQ5M9Q1 402 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 FAM27D1Q5T7N8 215 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 PRAMEF5Q5TYX0 476 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 RPL22L1Q6P5R6 122 aaKnown RBP5.86□□□□□ -1.47
LMO3-220ENST00000539232 BRICD5Q6PL45 260 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 GLDNQ6ZMI3 551 aaPredicted RBP5.86□□□□□ -1.47
LMO3-220ENST00000539232 LHFPL2Q6ZUX7 228 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 C5orf24Q7Z6I8 188 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 C15orf54Q8N8G6 183 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 CCDC54Q8NEL0 328 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 COQ8AQ8NI60 647 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 PLPPR1Q8TBJ4 325 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 HAVCR2Q8TDQ0 301 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 TCTEX1D2Q8WW35 142 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 SLC25A28Q96A46 364 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 SPSB1Q96BD6 273 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 C10orf35Q96D05 121 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 CXorf58Q96LI9 332 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 OR14A2Q96R54 314 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 TSNAXQ99598 290 aaKnown RBP5.86□□□□□ -1.47
LMO3-220ENST00000539232 C20orf85Q9H1P6 137 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 METTL8Q9H825 291 aaKnown RBP5.86□□□□□ -1.47
LMO3-220ENST00000539232 NOX4Q9NPH5 578 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 TAS2R3Q9NYW6 316 aa5.86□□□□□ -1.47
LMO3-220ENST00000539232 MGAT4CQ9UBM8 478 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms