RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 OR12D1P0DN82 309 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 F8A1P23610 371 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 PSMA1P25786 263 aaKnown RBP1.15□□□□□ -2.23
CCDC7-209ENST00000539197 INPP1P49441 399 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 GABARAPL2P60520 117 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 GTF2BQ00403 316 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 PAFAH1B3Q15102 231 aaKnown RBP1.15□□□□□ -2.23
CCDC7-209ENST00000539197 PDGFRLQ15198 375 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 C10orf91Q5T1B1 145 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 SPATA31B1PQ5VZV4 182 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 SCXQ7RTU7 201 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 SLC13A5Q86YT5 568 aaPredicted RBP1.15□□□□□ -2.23
CCDC7-209ENST00000539197 CD302Q8IX05 232 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 TMEM208Q9BTX3 173 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 ZNF426Q9BUY5 554 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 UGT2B28Q9BY64 529 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 AICDAQ9GZX7 198 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 IMP3Q9NV31 184 aaKnown RBP1.15□□□□□ -2.23
CCDC7-209ENST00000539197 C15orf41Q9Y2V0 281 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 LINC00588Q9Y4M8 146 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 PTPRKQ15262 1439 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 RAD50Q92878 1312 aa1.15□□□□□ -2.23
CCDC7-209ENST00000539197 MPDZO75970 2070 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 IGHV3OR15-7A0A075B7D8 119 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 C1orf232A0A0U1RR37 186 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 DAPL1A0PJW8 107 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 KNCNA6PVL3 124 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 FTCDNL1E5RQL4 147 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 ITGB1BP1O14713 200 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 COCHO43405 550 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 ARL6IP5O75915 188 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 SOX14O95416 240 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 TPM3P06753 285 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 OCMP0CE72 109 aaPredicted RBP1.14□□□□□ -2.23
CCDC7-209ENST00000539197 CTSEP14091 401 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 GADD45AP24522 165 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 GABRA3P34903 492 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 TPM4P67936 248 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 BSPH1Q075Z2 132 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 SMAGPQ0VAQ4 97 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 FOXF1Q12946 379 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 TSPAN31Q12999 210 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 C1DQ13901 141 aaKnown RBP1.14□□□□□ -2.23
CCDC7-209ENST00000539197 OR8G1Q15617 311 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 TBC1D28Q2M2D7 210 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 DNAL1Q4LDG9 190 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 TRMT12Q53H54 448 aaKnown RBP1.14□□□□□ -2.23
CCDC7-209ENST00000539197 MESTQ5EB52 335 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 ZBTB8OSQ8IWT0 167 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 DEFB119Q8N690 84 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 TMEM75Q8N9X5 138 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 STOML3Q8TAV4 291 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 HIST1H2BAQ96A08 127 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 GALMQ96C23 342 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 PPCDCQ96CD2 204 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 RBP7Q96R05 134 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 DCUN1D5Q9BTE7 237 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 GTSF1LQ9H1H1 148 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 TAS2R9Q9NYW1 312 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 TMEM216Q9P0N5 145 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 VPREB3Q9UKI3 123 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 CCL26Q9Y258 94 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 ATP6V1DQ9Y5K8 247 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 CRB1P82279 1406 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 CLUHO75153 1309 aa1.14□□□□□ -2.23
CCDC7-209ENST00000539197 M0QYV0 167 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 SLC25A20O43772 301 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 PSKH1P11801 424 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 UGT2B7P16662 529 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 ORM2P19652 201 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 BLVRBP30043 206 aaPredicted RBP1.13□□□□□ -2.23
CCDC7-209ENST00000539197 AGTR1P30556 359 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 PPP1CCP36873 323 aaKnown RBP1.13□□□□□ -2.23
CCDC7-209ENST00000539197 COILP38432 576 aaPredicted RBP1.13□□□□□ -2.23
CCDC7-209ENST00000539197 PSMB3P49720 205 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 RPL14P50914 215 aaKnown RBP1.13□□□□□ -2.23
CCDC7-209ENST00000539197 MAP3K7CLP57077 242 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 ACTBP60709 375 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 ACTG1P63261 375 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 COTL1Q14019 142 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 MAPK14Q16539 360 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 HLA-DRB5Q30154 266 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 SDHAF4Q5VUM1 108 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 DRAM2Q6UX65 266 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 PLEKHG7Q6ZR37 379 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 Q6ZRU5 148 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 NIT1Q86X76 327 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 FAM9CQ8IZT9 166 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 OR5K1Q8NHB7 308 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 DDI1Q8WTU0 396 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 TNFAIP8L1Q8WVP5 186 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 TAMM41Q96BW9 452 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 SMIM12Q96EX1 92 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 DNAJC30Q96LL9 226 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 EBNA1BP2Q99848 306 aaKnown RBP1.13□□□□□ -2.23
CCDC7-209ENST00000539197 METTL9Q9H1A3 318 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 C11orf49Q9H6J7 331 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 PLEKHJ1Q9NW61 149 aa1.13□□□□□ -2.23
CCDC7-209ENST00000539197 ZNHIT6Q9NWK9 470 aaKnown RBP1.13□□□□□ -2.23
CCDC7-209ENST00000539197 LINC00527Q9UJ94 153 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms