RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 KIAA1324LA8MWY0 1029 aaPredicted RBP10.63□□□□□ -0.71
USP3-203ENST00000538686 FOXS1O43638 330 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 CGAP01215 116 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 SLC35E2P0CK97 266 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 CCL1P22362 96 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 TIMP3P35625 211 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 FOXL2P58012 376 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 SEC11AP67812 179 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 DEFB134Q4QY38 66 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 ZNF776Q68DI1 518 aaPredicted RBP10.63□□□□□ -0.71
USP3-203ENST00000538686 KIAA0895LQ68EN5 471 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 FAM180AQ6UWF9 173 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 WDR82Q6UXN9 313 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 DOK3Q7L591 496 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 ERASQ7Z444 233 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 C6orf201Q7Z4U5 140 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.63□□□□□ -0.71
USP3-203ENST00000538686 WDR5BQ86VZ2 330 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 RPP25LQ8N5L8 163 aaKnown RBP10.63□□□□□ -0.71
USP3-203ENST00000538686 OR51E1Q8TCB6 317 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 VSTM2LQ96N03 204 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 KCNIP2Q9NS61 270 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 KIAA2026Q5HYC2 2103 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 PCNTO95613 3336 aa10.63□□□□□ -0.71
USP3-203ENST00000538686 MPDZO75970 2070 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 TRAV26-1A0A087WT03 109 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 MUC21A0A0G2JKD1 596 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 MUC21A0A140T8X8 626 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 LIPT2A6NK58 231 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 F2Z2F3 143 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 GLI4P10075 376 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 REG1BP48304 166 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 LGALS4P56470 323 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 OR1D5P58170 312 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 PDGFRLQ15198 375 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 KISS1Q15726 138 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 TBR1Q16650 682 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 MUC21Q5SSG8 566 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 SLC25A34Q6PIV7 304 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 ADAMTSL4Q6UY14 1074 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 LINC00346Q8IVM7 164 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 TAF15Q92804 592 aaKnown RBP eCLIP10.62□□□□□ -0.71
USP3-203ENST00000538686 CLEC7AQ9BXN2 247 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 FAM60AQ9NP50 221 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 PILRBQ9UKJ0 227 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 INSL6Q9Y581 213 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 ZNF205O95201 554 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 CYC1P08574 325 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 HIST1H1AQ02539 215 aaPredicted RBP10.62□□□□□ -0.71
USP3-203ENST00000538686 SLAQ13239 276 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 RNF144BQ7Z419 303 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 HAPLN4Q86UW8 402 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 CHRDL1Q9BU40 450 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 ULBP2Q9BZM5 246 aa10.62□□□□□ -0.71
USP3-203ENST00000538686 LRP5LA4QPB2 252 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 K7EP34 96 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 PAGE4O60829 102 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 DXOO77932 396 aaKnown RBP10.61□□□□□ -0.71
USP3-203ENST00000538686 CTSSP25774 331 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 GPM6AP51674 278 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 PLP1P60201 277 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 PSG4Q00888 419 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 MLF2Q15773 248 aaPredicted RBP10.61□□□□□ -0.71
USP3-203ENST00000538686 TMEM249Q2WGJ8 235 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 DCAF12Q5T6F0 453 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 FIGLAQ6QHK4 219 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 TM4SF19Q96DZ7 209 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 ZNF479Q96JC4 524 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 Q96M66 194 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 SLC22A20A6NK97 555 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 RAB29O14966 203 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 IER3P46695 156 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 UBE2G1P62253 170 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 HTD2P86397 168 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 RAB30Q15771 203 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 RPEL1Q2QD12 228 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 FNDC7Q5VTL7 733 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 TBC1D26Q86UD7 250 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 ATOH7Q8N100 152 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 OR8B3Q8NGG8 313 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 OR5D13Q8NGL4 314 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 OR4C3Q8NH37 302 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 POM121L2Q96KW2 1035 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 OR8B2Q96RD0 313 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 COMMD5Q9GZQ3 224 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 C1RLQ9NZP8 487 aa10.61□□□□□ -0.71
USP3-203ENST00000538686 C7orf71A4D174 169 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 C1QTNF9BB2RNN3 333 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 J3QR89 54 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 PPYP01298 95 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 COX5AP20674 150 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 HNRNPA2B1P22626 353 aaKnown RBP10.6□□□□□ -0.71
USP3-203ENST00000538686 PEBP1P30086 187 aaKnown RBP10.6□□□□□ -0.71
USP3-203ENST00000538686 FUT6P51993 359 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 IGFBP7Q16270 282 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 PRTGQ2VWP7 1150 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 MRPL21Q7Z2W9 205 aaKnown RBP10.6□□□□□ -0.71
USP3-203ENST00000538686 BCORP1Q8N888 145 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 TSKUQ8WUA8 353 aa10.6□□□□□ -0.71
USP3-203ENST00000538686 FER1L6-AS2Q96M78 137 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms