RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 BORCS5Q969J3 196 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 ZNF251Q9BRH9 671 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 DCUN1D5Q9BTE7 237 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 C19orf24Q9BVV8 132 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 NXF2Q9GZY0 626 aaKnown RBP10.51□□□□□ -0.73
CHFR-216ENST00000538235 DPM3Q9P2X0 92 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 GNG12Q9UBI6 72 aa10.51□□□□□ -0.73
CHFR-216ENST00000538235 A6NDX4 124 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 FAM181BA6NEQ2 426 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 H3BUI4 141 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 TMEM127O75204 238 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 APOA1P02647 267 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 DTYMKP23919 212 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 ZNF137PP52743 207 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 LINC00205P59089 165 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 PNLIPRP3Q17RR3 467 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 Q6ZS46 218 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 Q6ZS49 121 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 TMEM219Q86XT9 240 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 C8orf31Q8N9H6 132 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 MINDY2Q8NBR6 621 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 SSMEM1Q8WWF3 244 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 MALSU1Q96EH3 234 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 AGMATQ9BSE5 352 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 ABHD14AQ9BUJ0 271 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 RIMS4Q9H426 269 aaPredicted RBP10.5□□□□□ -0.73
CHFR-216ENST00000538235 KCNIP1Q9NZI2 227 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 SLC23A1Q9UHI7 598 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 VPREB3Q9UKI3 123 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 FAM96BQ9Y3D0 163 aa10.5□□□□□ -0.73
CHFR-216ENST00000538235 SAA2-SAA4A0A096LPE2 208 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 TRBV6-7A0A0A0MS04 114 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 A0A0A6YYH2 397 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 IGHV3-72A0A0B4J1Y9 119 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 A6NJ64 397 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 HSD17B6O14756 317 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 TIMM23O14925 209 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 YPEL1O60688 119 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 SAA2P0DJI9 122 aaPredicted RBP10.49□□□□□ -0.73
CHFR-216ENST00000538235 LGALS4P56470 323 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 GNG2P59768 71 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 SCGB2A2Q13296 93 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 RPL39P5Q59GN2 51 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 RNASE12Q5GAN4 147 aaKnown RBP10.49□□□□□ -0.73
CHFR-216ENST00000538235 TMEM69Q5SWH9 247 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 OR56B4Q8NH76 319 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 ACOT12Q8WYK0 555 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 CREB3L1Q96BA8 519 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 GALMQ96C23 342 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 ABHD14BQ96IU4 210 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 YPEL2Q96QA6 119 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 OCSTAMPQ9BR26 566 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 TOLLIPQ9H0E2 274 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 C11orf54Q9H0W9 315 aaPredicted RBP10.49□□□□□ -0.73
CHFR-216ENST00000538235 C1RLQ9NZP8 487 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 TCF19Q9Y242 345 aa10.49□□□□□ -0.73
CHFR-216ENST00000538235 IGKV1D-13A0A0B4J2D9 117 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 FAM90A9PA6NNJ1 464 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 LEUTXA8MZ59 168 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 TOR1AO14656 332 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 BET1O15155 118 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 IGKV1-13P0DP09 117 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 DYNLT3P51808 116 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 ZNF816Q0VGE8 651 aaPredicted RBP10.48□□□□□ -0.73
CHFR-216ENST00000538235 HABP2Q14520 560 aaPredicted RBP10.48□□□□□ -0.73
CHFR-216ENST00000538235 TMEM30BQ3MIR4 351 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 Q3ZCU0 254 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 LY6G6FQ5SQ64 297 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 CNIH2Q6PI25 160 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 SNX29P2Q8IUI4 249 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 H1FOOQ8IZA3 346 aaPredicted RBP10.48□□□□□ -0.73
CHFR-216ENST00000538235 TMEM86BQ8N661 226 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 DRAM1Q8N682 238 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 OR4A4PQ8NGN8 299 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 FAM216AQ8WUB2 273 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 RTN4IP1Q8WWV3 396 aaPredicted RBP10.48□□□□□ -0.73
CHFR-216ENST00000538235 TOMM40LQ969M1 308 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 ABHD1Q96SE0 405 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 ST6GALNAC5Q9BVH7 336 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 MRPL20Q9BYC9 149 aaKnown RBP10.48□□□□□ -0.73
CHFR-216ENST00000538235 RDH8Q9NYR8 311 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 EXTL2Q9UBQ6 330 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 POMT1Q9Y6A1 747 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 PLXNB1O43157 2135 aa10.48□□□□□ -0.73
CHFR-216ENST00000538235 IGHV1-3A0A0C4DH29 117 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 SH2D7A6NKC9 451 aaPredicted RBP10.47□□□□□ -0.73
CHFR-216ENST00000538235 RNF212BA8MTL3 300 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 SCGNO76038 276 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 AMY1AP04745 511 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 AMY2AP04746 511 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 MNDAP41218 407 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 PRRX1P54821 245 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 AANATQ16613 207 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 SRSF7Q16629 238 aaKnown RBP eCLIP10.47□□□□□ -0.73
CHFR-216ENST00000538235 C16orf87Q6PH81 154 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 RBMS3Q6XE24 437 aaKnown RBP10.47□□□□□ -0.73
CHFR-216ENST00000538235 Q6ZSV7 163 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 ZNF833PQ6ZTB9 187 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 HOGA1Q86XE5 327 aa10.47□□□□□ -0.73
CHFR-216ENST00000538235 LYG1Q8N1E2 194 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms