RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 C19orf12Q9NSK7 152 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 TRIM77I1YAP6 450 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 AGPAT2O15120 278 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 SPINT2O43291 252 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 CST7O76096 145 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 ID4P47928 161 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 PAX9P55771 341 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 CATR1Q13166 79 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 VHLLQ6RSH7 139 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 OR13A1Q8NGR1 328 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 PPP1R35Q8TAP8 253 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 ABHD17AQ96GS6 310 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 OR2V2Q96R30 315 aa13.12□□□□□ -0.31
MKS1-204ENST00000537529 KIAA1324LA8MWY0 1029 aaPredicted RBP13.11□□□□□ -0.31
MKS1-204ENST00000537529 A8MXE2 369 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 PRRG2O14669 202 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 DVL1P1P54792 670 aaPredicted RBP13.11□□□□□ -0.31
MKS1-204ENST00000537529 MIDNQ504T8 468 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 TMEM182Q6ZP80 229 aaPredicted RBP13.11□□□□□ -0.31
MKS1-204ENST00000537529 ODF3L1Q8IXM7 274 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 TMEM171Q8WVE6 324 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 RNF150Q9ULK6 438 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 TP53TG5Q9Y2B4 290 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 IGLV3-9A0A075B6K5 115 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 ATP6V1G2-DDX39BF2Z307 99 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 DNASE2O00115 360 aaPredicted RBP13.11□□□□□ -0.31
MKS1-204ENST00000537529 ZNF737O75373 536 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 CD5P06127 495 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 BMP5P22003 454 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 ATP6V0CP27449 155 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 PPP1CCP36873 323 aaKnown RBP13.11□□□□□ -0.31
MKS1-204ENST00000537529 SELENOVP59797 346 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 GUCA2BQ16661 112 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 IZUMO4Q1ZYL8 232 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 Q6ZRM9 215 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 PUSL1Q8N0Z8 303 aaKnown RBP13.11□□□□□ -0.31
MKS1-204ENST00000537529 GNPNAT1Q96EK6 184 aaPredicted RBP13.11□□□□□ -0.31
MKS1-204ENST00000537529 ATP5SQ99766 215 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 WSB1Q9Y6I7 421 aa13.11□□□□□ -0.31
MKS1-204ENST00000537529 INTS1Q8N201 2190 aaKnown RBP13.1□□□□□ -0.31
MKS1-204ENST00000537529 IGKV1D-17A0A075B6S4 117 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 UMAD1C9J7I0 102 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 TXNL1O43396 289 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 SYNGR2O43760 224 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 DFFBO76075 338 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 CD80P33681 288 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 SSTR5P35346 364 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 SULT1A1P50225 295 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 FOXC1Q12948 553 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 EDDM3AQ14507 147 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 MOGAT3Q86VF5 341 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 ZNF808Q8N4W9 903 aaPredicted RBP13.1□□□□□ -0.31
MKS1-204ENST00000537529 TMEM217Q8N7C4 229 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 TPRX1Q8N7U7 411 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 OR2G3Q8NGZ4 309 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 SNX22Q96L94 193 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 ESRP2Q9H6T0 727 aaKnown RBP13.1□□□□□ -0.31
MKS1-204ENST00000537529 MMP24Q9Y5R2 645 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 ARID1AO14497 2285 aa13.1□□□□□ -0.31
MKS1-204ENST00000537529 K7N7A8 449 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 NUPL2O15504 423 aaKnown RBP13.09□□□□□ -0.31
MKS1-204ENST00000537529 SPRY3O43610 288 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 SNAPINO95295 136 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 ADH4P08319 380 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 SFTA3P0C7M3 94 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 TDGF1P3P51864 188 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 HTD2P86397 168 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 FAM27E3Q08E93 113 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 EIF4EBP1Q13541 118 aaPredicted RBP13.09□□□□□ -0.31
MKS1-204ENST00000537529 MRGPRGQ86SM5 289 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 GCSAMQ8N6F7 178 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 TCTEX1D1Q8N7M0 179 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 COA4Q9NYJ1 87 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 ZNF292O60281 2723 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 LOC105371267A0A1B0GV96 52 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 FAM90A26D6RGX4 464 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 MGST3O14880 152 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 SNCAP37840 140 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 ZNF295-AS1Q8N0V1 137 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 FAM213BQ8TBF2 198 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 ITLN1Q8WWA0 313 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 C5orf30Q96GV9 206 aa13.09□□□□□ -0.31
MKS1-204ENST00000537529 CELSR3Q9NYQ7 3312 aa13.08□□□□□ -0.31
MKS1-204ENST00000537529 ODAMA1E959 279 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 C15orf65H3BRN8 121 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 C1QL1O75973 258 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 FHITP49789 147 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 TAS2R30P59541 319 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 PEA15Q15121 130 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 ZNF66Q6ZN08 573 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 DOLPP1Q86YN1 238 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 SPACA3Q8IXA5 215 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 FGFRL1Q8N441 504 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 LFNGQ8NES3 379 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 TCTEX1D2Q8WW35 142 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 PSENENQ9NZ42 101 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 IGHV3OR15-7A0A075B7D8 119 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 FAM74A7A6NL05 159 aa13.08□□□□□ -0.32
MKS1-204ENST00000537529 H3BP45 60 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms