RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 SELENOTP62341 195 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 TMEM78Q5T7P6 136 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 ZNF738Q8NE65 137 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 CT55Q8WUE5 264 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 RNF133Q8WVZ7 376 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 RSG1Q9BU20 258 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 CEP290O15078 2479 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 C21orf140B9A014 251 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 RPL36A-HNRNPH2H7BZ11 118 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 CXCL3P19876 107 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 WNT5AP41221 380 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 ECSCRQ19T08 205 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 EBLN2Q6P2I7 272 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 CALHM1Q8IU99 346 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 CHST5Q9GZS9 411 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 NPVFQ9HCQ7 196 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 IGHV1OR15-9A0A0B4J2B8 117 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 SEC16AO15027 2179 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 ZNF345Q14585 488 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 C9orf50Q5SZB4 431 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 TMEM171Q8WVE6 324 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 GPR35Q9HC97 309 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 CISD3P0C7P0 127 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 FABP2P12104 132 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 LGALSLQ3ZCW2 172 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-209ENST00000537178 C1QL3Q5VWW1 255 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 WDR74Q6RFH5 385 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-209ENST00000537178 C1orf174Q8IYL3 243 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 MUC15Q8N387 334 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 C9orf62Q8N4C0 152 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 TTC3P53804 2025 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 MPDU1O75352 247 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 TMEM50BP56557 158 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 LOXL3P58215 753 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 RPL31P62899 125 aaKnown RBP9.29□□□□□ -0.92
CLIP1-209ENST00000537178 GABRA6Q16445 453 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 LILRA6Q6PI73 481 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 C12orf54Q6X4T0 127 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 LHFPL5Q8TAF8 219 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 MARS2Q96GW9 593 aaKnown RBP9.29□□□□□ -0.92
CLIP1-209ENST00000537178 TMEM70Q9BUB7 260 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 FAM60AQ9NP50 221 aa9.29□□□□□ -0.92
CLIP1-209ENST00000537178 LOC107984156A0A0G2JMH3 177 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 TMEM189A5PLL7 270 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 VSIG8P0DPA2 414 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 BCL2P10415 239 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 BTF3P20290 206 aaKnown RBP9.28□□□□□ -0.92
CLIP1-209ENST00000537178 C16orf82Q7Z2V1 217 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 ARL17AQ8IVW1 177 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 STPG3Q8N7X2 389 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 PTPMT1Q8WUK0 201 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-209ENST00000537178 ASB5Q8WWX0 329 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 GPR61Q9BZJ8 451 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 CHRNA10Q9GZZ6 450 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 FLRT3Q9NZU0 649 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 LINC00862A6NCI5 91 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 GAGE10A6NGK3 116 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 C16orf97H3BN30 126 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 RPL27AP46776 148 aaKnown RBP9.28□□□□□ -0.92
CLIP1-209ENST00000537178 COMPP49747 757 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-209ENST00000537178 AESQ08117 197 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 PRNTQ86SH4 94 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 SYT8Q8NBV8 401 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 P2RX4Q99571 388 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 ALX4Q9H161 411 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-209ENST00000537178 TNFSF18Q9UNG2 199 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 MOB4Q9Y3A3 225 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 DOPEY2Q9Y3R5 2298 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 SVILO95425 2214 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 TRIP12Q14669 1992 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-209ENST00000537178 RAB29O14966 203 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 SS18L1O75177 396 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-209ENST00000537178 HPRT1P00492 218 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 PSG6Q00889 435 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 HOGA1Q86XE5 327 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 COPS9Q8WXC6 57 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 COX14Q96I36 57 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 UBTD1Q9HAC8 227 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 OR51B2Q9Y5P1 312 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 A0A1W2PS18 150 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 PITX3O75364 302 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 NAAAQ02083 359 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 TEX30Q5JUR7 227 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 DIRC2Q96SL1 478 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 CDX2Q99626 313 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-209ENST00000537178 V9GYH0 126 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 PPIAL4EA0A075B759 164 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 PPIAL4DF5H284 164 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 PPIAL4FP0DN26 164 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 PSG2P11465 335 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 MAGEA5P43359 124 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 NSUN5P2Q63ZY6 315 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 LHX8Q68G74 356 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 C1orf210Q8IVY1 113 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 OR10J6PQ8NGY7 276 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 SF3B6Q9Y3B4 125 aaKnown RBP9.28□□□□□ -0.92
CLIP1-209ENST00000537178 PPIAL4AQ9Y536 164 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 UNC13CQ8NB66 2214 aa9.28□□□□□ -0.92
CLIP1-209ENST00000537178 TCF21O43680 179 aa9.27□□□□□ -0.93
CLIP1-209ENST00000537178 ZNF205O95201 554 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms