RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TNFRSF14Q92956 283 aa9.41□□□□□ -0.9
CDCA3-206ENST00000536241 MRGPRFQ96AM1 343 aa9.41□□□□□ -0.9
CDCA3-206ENST00000536241 PRRT1Q99946 306 aa9.41□□□□□ -0.9
CDCA3-206ENST00000536241 TMEM133Q9H2Q1 129 aa9.41□□□□□ -0.9
CDCA3-206ENST00000536241 C7orf69Q9H7B7 122 aa9.41□□□□□ -0.9
CDCA3-206ENST00000536241 RBM7Q9Y580 266 aaKnown RBP9.41□□□□□ -0.9
CDCA3-206ENST00000536241 FLNBO75369 2602 aaKnown RBP9.41□□□□□ -0.9
CDCA3-206ENST00000536241 CSMD1Q96PZ7 3565 aa9.41□□□□□ -0.9
CDCA3-206ENST00000536241 ASH1LQ9NR48 2969 aaKnown RBP9.41□□□□□ -0.9
CDCA3-206ENST00000536241 A0A087X0M5 115 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 IGKV1D-13A0A0B4J2D9 117 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 A0A1B0GX30 115 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 SLC31A2O15432 143 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 ST8SIA5O15466 376 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 RGS11O94810 467 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 IGKV1-13P0DP09 117 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 SLC6A1P30531 599 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 LUMP51884 338 aaPredicted RBP9.4□□□□□ -0.9
CDCA3-206ENST00000536241 TMEM30BQ3MIR4 351 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 PLA1AQ53H76 456 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 PNKDQ8N490 385 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 ZNF439Q8NDP4 499 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 MARCH1Q8TCQ1 289 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 TOMM40LQ969M1 308 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 CREB3L1Q96BA8 519 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 MOB3AQ96BX8 217 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 TBX15Q96SF7 602 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 AGMATQ9BSE5 352 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 OCEL1Q9H607 264 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 HEXA-AS1Q9H8Q6 139 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 SLC2A8Q9NY64 477 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 ZNRD1Q9P1U0 126 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 AUP1Q9Y679 476 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 MAP1AP78559 2803 aaPredicted RBP9.4□□□□□ -0.9
CDCA3-206ENST00000536241 VPS13CQ709C8 3753 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 ABCA1O95477 2261 aa9.4□□□□□ -0.9
CDCA3-206ENST00000536241 IGHV2-26A0A0B4J1V2 119 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 J3QR06 171 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 AVPP01185 164 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 TCRBP04435 133 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 SPNP16150 400 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 GATA3P23771 443 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 COX7A1P24310 79 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 HERV-K104P61576 105 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 BAMBIQ13145 260 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 KLRD1Q13241 179 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 LY6G6FQ5SQ64 297 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 HCP5Q6MZN7 132 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 DUSP18Q8NEJ0 188 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 OR2AK2Q8NG84 335 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 OR13D1Q8NGV5 346 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 OR9G1Q8NH87 305 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 SECTM1Q8WVN6 248 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 EDARADDQ8WWZ3 215 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 ABHD14BQ96IU4 210 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 SLC5A7Q9GZV3 580 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 DPAGT1Q9H3H5 408 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 UNKLQ9H9P5 680 aaKnown RBP9.4□□□□□ -0.91
CDCA3-206ENST00000536241 CCL28Q9NRJ3 127 aa9.4□□□□□ -0.91
CDCA3-206ENST00000536241 A0A1W2PRD5 423 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 A0A1W2PRF3 423 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 A0A1W2PRM7 423 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 RNASEK-C17orf49H0YIS7 233 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 TOR1AO14656 332 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 ITGB1BP1O14713 200 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 HSD17B6O14756 317 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 NDUFB6O95139 128 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 PGAM2P15259 253 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 CD34P28906 385 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 GNRHRP30968 328 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 PRRX1P54821 245 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 RGS21Q2M5E4 152 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 Q3ZCU0 254 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 SLC25A48Q6ZT89 311 aaKnown RBP9.39□□□□□ -0.91
CDCA3-206ENST00000536241 ENKURQ8TC29 256 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 LHX4Q969G2 390 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 SLC25A21Q9BQT8 299 aaPredicted RBP9.39□□□□□ -0.91
CDCA3-206ENST00000536241 CLEC7AQ9BXN2 247 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 MMP28Q9H239 520 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 GPR132Q9UNW8 380 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 FLVCR2Q9UPI3 526 aa9.39□□□□□ -0.91
CDCA3-206ENST00000536241 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.38□□□□□ -0.919e-7■■■□□ 17.4
CDCA3-206ENST00000536241 MYO9AB2RTY4 2548 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 CENPVL3A0A0U1RRI6 287 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 ZNF16P17020 682 aaPredicted RBP9.38□□□□□ -0.91
CDCA3-206ENST00000536241 HOXB4P17483 251 aaPredicted RBP9.38□□□□□ -0.91
CDCA3-206ENST00000536241 PI3P19957 117 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 RAB7AP51149 207 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 UCP3P55916 312 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 RBMS2Q15434 407 aaKnown RBP9.38□□□□□ -0.91
CDCA3-206ENST00000536241 LPCAT3Q6P1A2 487 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 C1orf229Q6ZS94 237 aaPredicted RBP9.38□□□□□ -0.91
CDCA3-206ENST00000536241 LYG1Q8N1E2 194 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 OR11H6Q8NGC7 330 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 ZNF596Q8TC21 504 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 RTBDNQ9BSG5 229 aaPredicted RBP9.38□□□□□ -0.91
CDCA3-206ENST00000536241 ABHD14AQ9BUJ0 271 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 FXYD6Q9H0Q3 95 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 OR2D2Q9H210 308 aa9.38□□□□□ -0.91
CDCA3-206ENST00000536241 VSIG4Q9Y279 399 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms