RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 DMRTC2Q8IXT2 367 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-232ENST00000535094 FAM58AQ8N1B3 248 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 OR2T10Q8NGZ9 312 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 SSC4DQ8WTU2 575 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 SAMD10Q9BYL1 202 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 MTCH1Q9NZJ7 389 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 GTF3C1Q12789 2109 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 IGHV3-43A0A0B4J1X8 118 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 B4DEV8 164 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 IGHV3-43DP0DP04 118 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 MEF2BQ02080 365 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-232ENST00000535094 SLC25A53Q5H9E4 307 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 Q6ZRM9 215 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 CHRNA10Q9GZZ6 450 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 CHD3Q12873 2000 aaKnown RBP13.59□□□□□ -0.23
MCF2L-232ENST00000535094 SLC31A2O15432 143 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 FOXG1P55316 489 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-232ENST00000535094 TUSC5Q8IXB3 177 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 OR10P1Q8NGE3 313 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 IFI44Q8TCB0 444 aa13.59□□□□□ -0.23
MCF2L-232ENST00000535094 A0A1B0GU03 582 aa13.58□□□□□ -0.23
MCF2L-232ENST00000535094 UCP1P25874 307 aa13.58□□□□□ -0.23
MCF2L-232ENST00000535094 EXT1Q16394 746 aa13.58□□□□□ -0.23
MCF2L-232ENST00000535094 C17orf82Q86X59 251 aaPredicted RBP13.58□□□□□ -0.23
MCF2L-232ENST00000535094 CADM4Q8NFZ8 388 aa13.58□□□□□ -0.23
MCF2L-232ENST00000535094 A0A087WWC5 75 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 IFNL4K9M1U5 179 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 CRYGSP22914 178 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 GABRA2P47869 451 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 ARL16Q0P5N6 197 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 TMPRSS7Q7RTY8 843 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 FAM103A1Q9BTL3 118 aaKnown RBP13.58□□□□□ -0.24
MCF2L-232ENST00000535094 DUSP23Q9BVJ7 150 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 SDF2L1Q9HCN8 221 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 TUBG2Q9NRH3 451 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 ATP23Q9Y6H3 246 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 TMEM131Q92545 1883 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 CYB561P49447 251 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 HERPUD1Q15011 391 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 PCOLCEQ15113 449 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 TAAR3PQ9P1P4 343 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 TRAPPC1Q9Y5R8 145 aa13.58□□□□□ -0.24
MCF2L-232ENST00000535094 RHBDL1O75783 438 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 CEBPDP49716 269 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-232ENST00000535094 FOXO1Q12778 655 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 EDDM3AQ14507 147 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 OR8B8Q15620 311 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 FAM90A2PQ658T7 463 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 TPRX1Q8N7U7 411 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 TMEM56Q96MV1 263 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 IL17BQ9UHF5 180 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 TMEM56-RWDD3S4R434 201 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 H0Y980 276 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 IGLV3-19P01714 112 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 AMBPP02760 352 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 TOMM20LQ6UXN7 152 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 FADS6Q8N9I5 356 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 PARLQ9H300 379 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 PGPEP1LA6NFU8 196 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 KIAA1324LA8MWY0 1029 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-232ENST00000535094 OTX1P32242 354 aaPredicted RBP13.57□□□□□ -0.24
MCF2L-232ENST00000535094 FGF12P61328 243 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 C20orf204Q6ZNR8 217 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 DDA1Q9BW61 102 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 OBP2BQ9NPH6 170 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 CRIM1Q9NZV1 1036 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 NBASA2RRP1 2371 aa13.57□□□□□ -0.24
MCF2L-232ENST00000535094 ZNF25P17030 456 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-232ENST00000535094 MSMO1Q15800 293 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 PDLIM3Q53GG5 364 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-232ENST00000535094 OR51G1Q8NGK1 321 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 TAF15Q92804 592 aaKnown RBP eCLIP13.56□□□□□ -0.24
MCF2L-232ENST00000535094 MS4A10Q96PG2 267 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 ACTR3CQ9C0K3 210 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-232ENST00000535094 GRIFINA4D1Z8 144 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 GYPAP02724 150 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 SLC25A6P12236 298 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 NMSQ5H8A3 153 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 BAGE3Q86Y29 109 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 BAGE2Q86Y30 109 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 OR5D13Q8NGL4 314 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 SIGLEC12Q96PQ1 595 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 PHF7Q9BWX1 381 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-232ENST00000535094 GCM1Q9NP62 436 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 CISD1Q9NZ45 108 aaKnown RBP13.56□□□□□ -0.24
MCF2L-232ENST00000535094 A0A1B0GUS0 222 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 PAX5Q02548 391 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 SSX7Q7RTT5 188 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 TMEM183AQ8IXX5 376 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 OR2D2Q9H210 308 aa13.56□□□□□ -0.24
MCF2L-232ENST00000535094 LIN7CQ9NUP9 197 aaKnown RBP13.56□□□□□ -0.24
MCF2L-232ENST00000535094 C11orf94C9JXX5 98 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 CDIPTO14735 213 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 COX5AP20674 150 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 THBS3P49746 956 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 SLC10A1Q14973 349 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 H2BFWTQ7Z2G1 175 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 CARFQ8N187 725 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 APH1AQ96BI3 265 aa13.55□□□□□ -0.24
MCF2L-232ENST00000535094 PINX1Q96BK5 328 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms