RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 CLEC2LP0C7M8 214 aa17.02■□□□□ 0.32
PKP3-211ENST00000534401 CD1BP29016 333 aa17.02■□□□□ 0.32
PKP3-211ENST00000534401 PPP1CCP36873 323 aaKnown RBP17.02■□□□□ 0.32
PKP3-211ENST00000534401 CAPSLQ8WWF8 208 aa17.02■□□□□ 0.32
PKP3-211ENST00000534401 CMSS1Q9BQ75 279 aaKnown RBP17.02■□□□□ 0.32
PKP3-211ENST00000534401 TOLLIPQ9H0E2 274 aa17.02■□□□□ 0.32
PKP3-211ENST00000534401 ABRACLQ9P1F3 81 aa17.02■□□□□ 0.32
PKP3-211ENST00000534401 METTL21EPA6NDL7 271 aa17.01■□□□□ 0.31
PKP3-211ENST00000534401 M0QZK8 103 aa17.01■□□□□ 0.31
PKP3-211ENST00000534401 TXNL1O43396 289 aa17.01■□□□□ 0.31
PKP3-211ENST00000534401 TMEM127O75204 238 aa17.01■□□□□ 0.31
PKP3-211ENST00000534401 RGS11O94810 467 aa17.01■□□□□ 0.31
PKP3-211ENST00000534401 HIST1H1DP16402 221 aaKnown RBP17.01■□□□□ 0.31
PKP3-211ENST00000534401 HLA-DRB3P79483 266 aa17.01■□□□□ 0.31
PKP3-211ENST00000534401 TIMM50Q3ZCQ8 353 aa17.01■□□□□ 0.31
PKP3-211ENST00000534401 CHMP1AQ9HD42 196 aaPredicted RBP17.01■□□□□ 0.31
PKP3-211ENST00000534401 VCX3AQ9NNX9 186 aa17.01■□□□□ 0.31
PKP3-211ENST00000534401 LOC100506127A0A0U1RQW1 187 aa17■□□□□ 0.31
PKP3-211ENST00000534401 SERPINE3A8MV23 424 aa17■□□□□ 0.31
PKP3-211ENST00000534401 HERPUD1Q15011 391 aa17■□□□□ 0.31
PKP3-211ENST00000534401 SRSF7Q16629 238 aaKnown RBP eCLIP17■□□□□ 0.31
PKP3-211ENST00000534401 KLHDC1Q8N7A1 406 aa17■□□□□ 0.31
PKP3-211ENST00000534401 AGMATQ9BSE5 352 aa17■□□□□ 0.31
PKP3-211ENST00000534401 ABHD14AQ9BUJ0 271 aa17■□□□□ 0.31
PKP3-211ENST00000534401 DAPK2Q9UIK4 370 aa17■□□□□ 0.31
PKP3-211ENST00000534401 IGKV1-6A0A0C4DH72 117 aa16.99■□□□□ 0.31
PKP3-211ENST00000534401 FGF16O43320 207 aa16.99■□□□□ 0.31
PKP3-211ENST00000534401 DIRAS3O95661 229 aa16.99■□□□□ 0.31
PKP3-211ENST00000534401 REG1BP48304 166 aa16.99■□□□□ 0.31
PKP3-211ENST00000534401 Q6ZS49 121 aa16.99■□□□□ 0.31
PKP3-211ENST00000534401 EAF1Q96JC9 268 aaPredicted RBP16.99■□□□□ 0.31
PKP3-211ENST00000534401 IFI27L2Q9H2X8 130 aa16.99■□□□□ 0.31
PKP3-211ENST00000534401 MOB4Q9Y3A3 225 aa16.99■□□□□ 0.31
PKP3-211ENST00000534401 TRDCB7Z8K6 153 aa16.98■□□□□ 0.31
PKP3-211ENST00000534401 IGKV1D-33P01593 117 aa16.98■□□□□ 0.31
PKP3-211ENST00000534401 IGKV1-33P01594 117 aa16.98■□□□□ 0.31
PKP3-211ENST00000534401 SCTP09683 121 aa16.98■□□□□ 0.31
PKP3-211ENST00000534401 SNRPBP14678 240 aaKnown RBP16.98■□□□□ 0.31
PKP3-211ENST00000534401 ARL6IP1Q15041 203 aa16.98■□□□□ 0.31
PKP3-211ENST00000534401 ZNF833PQ6ZTB9 187 aa16.98■□□□□ 0.31
PKP3-211ENST00000534401 MOB3BQ86TA1 216 aa16.98■□□□□ 0.31
PKP3-211ENST00000534401 TGIF2LXQ8IUE1 241 aa16.98■□□□□ 0.31
PKP3-211ENST00000534401 ZNF251Q9BRH9 671 aa16.98■□□□□ 0.31
PKP3-211ENST00000534401 PLSCR3Q9NRY6 295 aa16.98■□□□□ 0.31
PKP3-211ENST00000534401 TET2Q6N021 2002 aaPredicted RBP16.97■□□□□ 0.31
PKP3-211ENST00000534401 AIREO43918 545 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 FCGR3AP08637 254 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 CD3GP09693 182 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 SMIM18P0DKX4 95 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 GNB3P16520 340 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 TMEM11P17152 192 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 MXD1Q05195 221 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 FAM71F2Q6NXP2 309 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 LYG1Q8N1E2 194 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 C5orf56Q8N8D9 126 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 LGALS14Q8TCE9 139 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 IL1F10Q8WWZ1 152 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 PARP12Q9H0J9 701 aaKnown RBP16.97■□□□□ 0.31
PKP3-211ENST00000534401 ATG5Q9H1Y0 275 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 GHITMQ9H3K2 345 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 SLC23A1Q9UHI7 598 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 ETV7Q9Y603 341 aa16.97■□□□□ 0.31
PKP3-211ENST00000534401 ZNF736B4DX44 427 aaPredicted RBP16.96■□□□□ 0.31
PKP3-211ENST00000534401 SCGNO76038 276 aa16.96■□□□□ 0.31
PKP3-211ENST00000534401 LPLP06858 475 aa16.96■□□□□ 0.31
PKP3-211ENST00000534401 LSAMPQ13449 338 aa16.96■□□□□ 0.31
PKP3-211ENST00000534401 ABCA11PQ4W5N1 156 aa16.96■□□□□ 0.31
PKP3-211ENST00000534401 OR2AK2Q8NG84 335 aa16.96■□□□□ 0.31
PKP3-211ENST00000534401 OR4A4PQ8NGN8 299 aa16.96■□□□□ 0.31
PKP3-211ENST00000534401 OR13F1Q8NGS4 319 aa16.96■□□□□ 0.31
PKP3-211ENST00000534401 OR2T10Q8NGZ9 312 aa16.96■□□□□ 0.31
PKP3-211ENST00000534401 SETD6Q8TBK2 473 aa16.96■□□□□ 0.31
PKP3-211ENST00000534401 SLC25A38Q96DW6 304 aa16.96■□□□□ 0.31
PKP3-211ENST00000534401 CABLES2Q9BTV7 478 aa16.96■□□□□ 0.31
PKP3-211ENST00000534401 IGHV3-72A0A0B4J1Y9 119 aa16.95■□□□□ 0.3
PKP3-211ENST00000534401 ZBTB25P24278 435 aa16.95■□□□□ 0.3
PKP3-211ENST00000534401 VDAC2P45880 294 aaPredicted RBP16.95■□□□□ 0.3
PKP3-211ENST00000534401 ZNF260Q3ZCT1 412 aa16.95■□□□□ 0.3
PKP3-211ENST00000534401 CDNFQ49AH0 187 aa16.95■□□□□ 0.3
PKP3-211ENST00000534401 OR5H6Q8NGV6 325 aa16.95■□□□□ 0.3
PKP3-211ENST00000534401 NABP2Q9BQ15 211 aa16.95■□□□□ 0.3
PKP3-211ENST00000534401 C11orf54Q9H0W9 315 aaPredicted RBP16.95■□□□□ 0.3
PKP3-211ENST00000534401 RHBDL2Q9NX52 303 aa16.95■□□□□ 0.3
PKP3-211ENST00000534401 OR1A1Q9P1Q5 309 aa16.95■□□□□ 0.3
PKP3-211ENST00000534401 CMYA5Q8N3K9 4069 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 SAA2-SAA4A0A096LPE2 208 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 PROP1O75360 226 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 MOSP00540 346 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 GSTP1P09211 210 aaKnown RBP16.94■□□□□ 0.3
PKP3-211ENST00000534401 SAA2P0DJI9 122 aaPredicted RBP16.94■□□□□ 0.3
PKP3-211ENST00000534401 VSIG10L2P0DP72 767 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 DTYMKP23919 212 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 TGFBR1P36897 503 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 RPS19P39019 145 aaKnown RBP16.94■□□□□ 0.3
PKP3-211ENST00000534401 CEACAM6P40199 344 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 OR3A3P47888 321 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 HES1Q14469 280 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 HNF4GQ14541 408 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 KIR2DS1Q14954 304 aa16.94■□□□□ 0.3
PKP3-211ENST00000534401 TMEM95Q3KNT9 176 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms