RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 GAB2Q9UQC2 676 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 FGF12P61328 243 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 GAGE1Q13065 139 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 ELOBQ15370 118 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 KRTAP27-1Q3LI81 207 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 ABLIM2Q6H8Q1 611 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 FAM185AQ8N0U4 392 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 YPEL4Q96NS1 127 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 OR1A1Q9P1Q5 309 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 ZNF391Q9UJN7 358 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 PILRBQ9UKJ0 227 aa16.48■□□□□ 0.23
CAPN1-226ENST00000533820 PGA5P0DJD9 388 aa16.47■□□□□ 0.23
CAPN1-226ENST00000533820 PSMF1Q92530 271 aa16.47■□□□□ 0.23
CAPN1-226ENST00000533820 USF3Q68DE3 2245 aa16.47■□□□□ 0.23
CAPN1-226ENST00000533820 MED13Q9UHV7 2174 aa16.47■□□□□ 0.23
CAPN1-226ENST00000533820 UCP1P25874 307 aa16.47■□□□□ 0.23
CAPN1-226ENST00000533820 TFPI2P48307 235 aa16.47■□□□□ 0.23
CAPN1-226ENST00000533820 CYB561P49447 251 aa16.47■□□□□ 0.23
CAPN1-226ENST00000533820 HIST1H2AAQ96QV6 131 aa16.47■□□□□ 0.23
CAPN1-226ENST00000533820 A0A1W2PR80 420 aa16.47■□□□□ 0.23
CAPN1-226ENST00000533820 HMGB3O15347 200 aaKnown RBP16.47■□□□□ 0.23
CAPN1-226ENST00000533820 CEACAM8P31997 349 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-226ENST00000533820 CLDND2Q8NHS1 167 aa16.47■□□□□ 0.23
CAPN1-226ENST00000533820 GNPNAT1Q96EK6 184 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-226ENST00000533820 REPIN1Q9BWE0 567 aaKnown RBP16.47■□□□□ 0.23
CAPN1-226ENST00000533820 RHBDL1O75783 438 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 CRYABP02511 175 aaKnown RBP16.46■□□□□ 0.23
CAPN1-226ENST00000533820 RIPPLY2Q5TAB7 128 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 TVP23CQ96ET8 276 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 ATP5SQ99766 215 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 PARD6AQ9NPB6 346 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 RPRMQ9NS64 109 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 CACNG5Q9UF02 275 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 KCNS2Q9ULS6 477 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 CBY3A6NI87 242 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 PDGFBP01127 241 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-226ENST00000533820 F2RP25116 425 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 ELLP55199 621 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-226ENST00000533820 TEX38Q6PEX7 206 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 DNAJC4Q9NNZ3 241 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 PRDM6Q9NQX0 595 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 LRFN1Q9P244 771 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 ATP23Q9Y6H3 246 aa16.46■□□□□ 0.23
CAPN1-226ENST00000533820 DNPH1O43598 174 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 IFNA5P01569 189 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 TLE4Q04727 773 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 TCFL5Q9UL49 500 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 RNF115Q9Y4L5 304 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 KIR2DS1A0A191URI9 304 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 KIR2DS4P43632 304 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 RPS16P62249 146 aaKnown RBP16.45■□□□□ 0.22
CAPN1-226ENST00000533820 KIR2DS1Q14954 304 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 CEACAM21Q3KPI0 293 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 PCSK4Q6UW60 755 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 SPSB4Q96A44 273 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 PRDM14Q9GZV8 571 aa16.45■□□□□ 0.22
CAPN1-226ENST00000533820 NXPH2O95156 264 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 TAS2R30P59541 319 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 PMS2CLQ68D20 193 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 CLDN23Q96B33 292 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 ASPMQ8IZT6 3477 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 AMBPP02760 352 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 CA6P23280 308 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 ARL16Q0P5N6 197 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 MRPL30Q8TCC3 161 aaKnown RBP16.44■□□□□ 0.22
CAPN1-226ENST00000533820 FAM122AQ96E09 287 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 C12orf49Q9H741 205 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 LPAR2Q9HBW0 351 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 PLA2G3Q9NZ20 509 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 WDR1O75083 606 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 TUSC2O75896 110 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 IRF2P14316 349 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 SSX7Q7RTT5 188 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 ZNF295-AS1Q8N0V1 137 aa16.44■□□□□ 0.22
CAPN1-226ENST00000533820 LOC400499M0QZD8 3231 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 CD300LBA8K4G0 201 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 SIRPB1O00241 398 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 CLEC12BQ2HXU8 276 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 SCGB1C1Q8TD33 95 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 TRAV24A0A0B4J272 114 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 A0A1B0GW64 132 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 A8MXE2 369 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 IFNL4K9M1U5 179 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 TRIM61Q5EBN2 209 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 ZNF506Q5JVG8 444 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 SPANXN5Q5MJ07 72 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 ZNF880Q6PDB4 577 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 PLK3Q9H4B4 646 aa16.43■□□□□ 0.22
CAPN1-226ENST00000533820 MMP9P14780 707 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 MAS1LP35410 378 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 HOXA4Q00056 320 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-226ENST00000533820 PAX5Q02548 391 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 ZNF787Q6DD87 383 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 COLCA1Q6ZS62 124 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 OR5D13Q8NGL4 314 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 GPR87Q9BY21 358 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 OR2W1Q9Y3N9 320 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 H0Y980 276 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 DVL1O14640 695 aa16.42■□□□□ 0.22
CAPN1-226ENST00000533820 GFRA1P56159 465 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms