RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 RBKSQ9H477 322 aa14.08□□□□□ -0.15
CTSB-228ENST00000533455 SERPINA7P05543 415 aa14.08□□□□□ -0.16
CTSB-228ENST00000533455 PFN1P07737 140 aaKnown RBP14.08□□□□□ -0.16
CTSB-228ENST00000533455 LHX2P50458 406 aa14.08□□□□□ -0.16
CTSB-228ENST00000533455 TUSC5Q8IXB3 177 aa14.08□□□□□ -0.16
CTSB-228ENST00000533455 TMEM183AQ8IXX5 376 aa14.08□□□□□ -0.16
CTSB-228ENST00000533455 C17orf78Q8N4C9 275 aa14.08□□□□□ -0.16
CTSB-228ENST00000533455 IL1F10Q8WWZ1 152 aa14.08□□□□□ -0.16
CTSB-228ENST00000533455 OR51I2Q9H344 312 aa14.08□□□□□ -0.16
CTSB-228ENST00000533455 ESPL1Q14674 2120 aa14.08□□□□□ -0.16
CTSB-228ENST00000533455 J3QT63 122 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 ZNF737O75373 536 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 KBTBD11O94819 623 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 DUSP3P51452 185 aaPredicted RBP14.07□□□□□ -0.16
CTSB-228ENST00000533455 CLDN18P56856 261 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 SLC38A11Q08AI6 406 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 NCR3LG1Q68D85 454 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 TMEM14EPQ6UXP3 125 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 REC114Q7Z4M0 266 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 TGIF2LYQ8IUE0 185 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 OR4X1Q8NH49 305 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 SNX22Q96L94 193 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 PPP1R3CQ9UQK1 317 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 ARGFXA6NJG6 315 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 LILRA1O75019 489 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 PAX1P15863 534 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 CLN3Q13286 438 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 C4orf17Q53FE4 359 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 SMIM7Q9BQ49 75 aa14.07□□□□□ -0.16
CTSB-228ENST00000533455 SMCO3A2RU48 225 aa14.06□□□□□ -0.16
CTSB-228ENST00000533455 JMJD7P0C870 316 aa14.06□□□□□ -0.16
CTSB-228ENST00000533455 ELLP55199 621 aaPredicted RBP14.06□□□□□ -0.16
CTSB-228ENST00000533455 MEF2BQ02080 365 aaPredicted RBP14.06□□□□□ -0.16
CTSB-228ENST00000533455 PLP2Q04941 152 aa14.06□□□□□ -0.16
CTSB-228ENST00000533455 TMEM241Q24JQ0 296 aa14.06□□□□□ -0.16
CTSB-228ENST00000533455 COA6Q5JTJ3 125 aaKnown RBP14.06□□□□□ -0.16
CTSB-228ENST00000533455 SPANXN5Q5MJ07 72 aa14.06□□□□□ -0.16
CTSB-228ENST00000533455 ZNF497Q6ZNH5 498 aa14.06□□□□□ -0.16
CTSB-228ENST00000533455 C16orf82Q7Z2V1 217 aa14.06□□□□□ -0.16
CTSB-228ENST00000533455 RNASEH2CQ8TDP1 164 aaKnown RBP14.06□□□□□ -0.16
CTSB-228ENST00000533455 LHX4Q969G2 390 aa14.06□□□□□ -0.16
CTSB-228ENST00000533455 ZNF703Q9H7S9 590 aaPredicted RBP14.06□□□□□ -0.16
CTSB-228ENST00000533455 DOCK10Q96BY6 2186 aa14.06□□□□□ -0.16
CTSB-228ENST00000533455 UBE2L5PA0A1B0GUS4 154 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 B4E171 279 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 TSTD3H0UI37 97 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 TMEM250H0YL14 139 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 DVL1O14640 695 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 SYNGR4O95473 234 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 LY86O95711 162 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 IGKV1D-33P01593 117 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 IGKV1-33P01594 117 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 DDTP30046 118 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 IL2RGP31785 369 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 WNT5AP41221 380 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 TSPAN7P41732 249 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 ADIRFQ15847 76 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 RPP25LQ8N5L8 163 aaKnown RBP14.05□□□□□ -0.16
CTSB-228ENST00000533455 RHOVQ96L33 236 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 SLC39A9Q9NUM3 307 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 UFSP2Q9NUQ7 469 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 PRSS50Q9UI38 385 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 ARHGAP21Q5T5U3 1957 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 KIAA2026Q5HYC2 2103 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 TMEM265A0A087WTH1 108 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 RNF212BA8MTL3 300 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 RHBDL1O75783 438 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 SRYQ05066 204 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 JOSD1Q15040 202 aaPredicted RBP14.05□□□□□ -0.16
CTSB-228ENST00000533455 BEND4Q6ZU67 534 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 DRAM1Q8N682 238 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 OR1K1Q8NGR3 316 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 APH1AQ96BI3 265 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 FAM173AQ9BQD7 235 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 GPR87Q9BY21 358 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 KCNS2Q9ULS6 477 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 SIT1Q9Y3P8 196 aa14.05□□□□□ -0.16
CTSB-228ENST00000533455 COL27A1Q8IZC6 1860 aaPredicted RBP14.04□□□□□ -0.16
CTSB-228ENST00000533455 CFIP05156 583 aa14.04□□□□□ -0.16
CTSB-228ENST00000533455 SSTP61278 116 aa14.04□□□□□ -0.16
CTSB-228ENST00000533455 RPL23P62829 140 aaKnown RBP14.04□□□□□ -0.16
CTSB-228ENST00000533455 SSPNQ14714 243 aa14.04□□□□□ -0.16
CTSB-228ENST00000533455 BSXQ3C1V8 233 aa14.04□□□□□ -0.16
CTSB-228ENST00000533455 OR2M7Q8NG81 312 aa14.04□□□□□ -0.16
CTSB-228ENST00000533455 MBNL3Q9NUK0 354 aaKnown RBP14.04□□□□□ -0.16
CTSB-228ENST00000533455 WIPI2Q9Y4P8 454 aa14.04□□□□□ -0.16
CTSB-228ENST00000533455 CTXND1A0A1B0GTU2 59 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 A0A1W2PR80 420 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 C3orf80F5H4A9 247 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 MKRN2OSH3BPM6 223 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 ZNF16P17020 682 aaPredicted RBP14.03□□□□□ -0.16
CTSB-228ENST00000533455 HOXA6P31267 233 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 TNFRSF9Q07011 255 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 ATP6V1FQ16864 119 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 ACSM6Q6P461 480 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.03□□□□□ -0.16
CTSB-228ENST00000533455 Q8IYB0 196 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 OR51G1Q8NGK1 321 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 OR1P1Q8NH06 330 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 CT55Q8WUE5 264 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms