RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 A0A1W2PPB8 328 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 A0A1W2PRS3 328 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 KIR3DP1A8MWS1 328 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 CHEK1O14757 476 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 PGLYRP1O75594 196 aaPredicted RBP13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 CELA3AP09093 270 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 COX7A1P24310 79 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 GNB2P62879 340 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 MISP3Q96FF7 219 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 OR1A1Q9P1Q5 309 aa13.17□□□□□ -0.3
PCDHA3-202ENST00000532566 FBP1P09467 338 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 SSTP61278 116 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 SERF2P84101 59 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 ZNF705AQ6ZN79 300 aaPredicted RBP13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 OR52L2PQ8NGH6 319 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 FAM117AQ9C073 453 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 CLN5O75503 358 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 C1QL1O75973 258 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 NTF3P20783 257 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 POC1AQ8NBT0 407 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 NPAS1Q99742 590 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 PRNDQ9UKY0 176 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 J3QW42 95 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 MARVELD3Q96A59 401 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 GPHA2Q96T91 129 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 GFI1Q99684 422 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 ZNF586Q9NXT0 402 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 CLN8Q9UBY8 286 aa13.16□□□□□ -0.3
PCDHA3-202ENST00000532566 CTXND1A0A1B0GTU2 59 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 H3BQ15 152 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 SPP1P10451 314 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 GUCA2BQ16661 112 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 C2orf68Q2NKX9 166 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 NRN1LQ496H8 165 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 KHDC3LQ587J8 217 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 FAM209AQ5JX71 171 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 FGF11Q92914 225 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 RAB1CQ92928 201 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 FBLN5Q9UBX5 448 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 B4DEV8 164 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 CLDN14O95500 239 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 F12P00748 615 aaPredicted RBP13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 HOXD4P09016 255 aaPredicted RBP13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 SLC35E3Q7Z769 313 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 TCTEX1D1Q8N7M0 179 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 KLF14Q8TD94 323 aaPredicted RBP13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 GP6Q9HCN6 339 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 C11orf94C9JXX5 98 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 NPY1RP25929 384 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 DLK1P80370 383 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 SCGB2A2Q13296 93 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 TMEM187Q14656 261 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 OR2V2Q96R30 315 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 THADAQ6YHU6 1953 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
PCDHA3-202ENST00000532566 DPPA3Q6W0C5 159 aa13.15□□□□□ -0.31
PCDHA3-202ENST00000532566 MYPOPQ86VE0 399 aaPredicted RBP13.15□□□□□ -0.31
PCDHA3-202ENST00000532566 H1FOOQ8IZA3 346 aaPredicted RBP13.15□□□□□ -0.31
PCDHA3-202ENST00000532566 PUSL1Q8N0Z8 303 aaKnown RBP13.15□□□□□ -0.31
PCDHA3-202ENST00000532566 SSMEM1Q8WWF3 244 aa13.15□□□□□ -0.31
PCDHA3-202ENST00000532566 MARS2Q96GW9 593 aaKnown RBP13.15□□□□□ -0.31
PCDHA3-202ENST00000532566 GINS3Q9BRX5 216 aa13.15□□□□□ -0.31
PCDHA3-202ENST00000532566 ZNF552Q9H707 407 aaPredicted RBP13.15□□□□□ -0.31
PCDHA3-202ENST00000532566 SEBOXQ9HB31 216 aaPredicted RBP13.15□□□□□ -0.31
PCDHA3-202ENST00000532566 TIMM9Q9Y5J7 89 aa13.15□□□□□ -0.31
PCDHA3-202ENST00000532566 TRAPPC1Q9Y5R8 145 aa13.15□□□□□ -0.31
PCDHA3-202ENST00000532566 TMEM11P17152 192 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 KLK2P20151 261 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 MPV17P39210 176 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 TGIF2LYQ8IUE0 185 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 TGIF2LXQ8IUE1 241 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 SIGLECL1Q8N7X8 197 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 OR52M1Q8NGK5 317 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 RAB1BQ9H0U4 201 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 CTRB1P17538 263 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 RAB5AP20339 215 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 GNG4P50150 75 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 RPL11P62913 178 aaKnown RBP13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 ZFP36L1Q07352 338 aaKnown RBP13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 KRTCAP3Q53RY4 240 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 CTRB2Q6GPI1 263 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 HARBI1Q96MB7 349 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 TMPRSS5Q9H3S3 457 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 AMMECR1Q9Y4X0 333 aaPredicted RBP13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 HPRT1P00492 218 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 RBP4P02753 201 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 ZNF708P17019 499 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 RPL31P62899 125 aaKnown RBP13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 CCL8P80075 99 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 OR1L1Q8NH94 360 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 SLC25A28Q96A46 364 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 TXN2Q99757 166 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 KLHDC3Q9BQ90 382 aa13.14□□□□□ -0.31
PCDHA3-202ENST00000532566 NCBP2LA6PVI3 153 aaKnown RBP13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 KLF7O75840 302 aaPredicted RBP13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 SSX8Q7RTT4 187 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 SELENOHQ8IZQ5 122 aaKnown RBP13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 TMEM167BQ9NRX6 74 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 CRYBA1P05813 215 aa13.13□□□□□ -0.31
PCDHA3-202ENST00000532566 CEACAM3P40198 252 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms