RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	UQCC1	Q9NVA1	299 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	CRIM1	Q9NZV1	1036 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	TIMM9	Q9Y5J7	89 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	DNASE2	O00115	360 aa	Predicted RBP	13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	TMEM255A	Q5JRV8	349 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ETFRF1	Q6IPR1	90 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	RPUSD3	Q6P087	351 aa	Known RBP	13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	WBP1	Q96G27	269 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SSX3	Q99909	188 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	CACNA1D	Q01668	2161 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	IQCF6	A8MYZ5	107 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	GNG7	O60262	68 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	NPBWR1	P48145	328 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SAXO1	Q8IYX7	474 aa		13.37	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SNRNP70	P08621	437 aa	Known RBP	13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SLC38A11	Q08AI6	406 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	OR4D10	Q8NGI6	311 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	TLNRD1	Q9H1K6	362 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	TFF1	P04155	84 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	PF4V1	P10720	104 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504		Q96M66	194 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	TMEM147	Q9BVK8	224 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	CLEC7A	Q9BXN2	247 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504		Q9N2K0	584 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504		V9GYH0	126 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	RRAS	P10301	218 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ORM2	P19652	201 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	LYZ	P61626	148 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	RAB18	Q9NP72	206 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	DUS4L	O95620	317 aa	Known RBP	13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ADAD2	Q8NCV1	583 aa	Known RBP	13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	POM121	Q96HA1	1249 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SLC25A32	Q9H2D1	315 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504		V9GYS6	101 aa		13.36	□□□□□ -0.27
PPFIA1-222	ENST00000532504	RAB40C	Q96S21	281 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	DCTN5	Q9BTE1	182 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	GNG13	Q9P2W3	67 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	METTL1	Q9UBP6	276 aa	Known RBP	13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	CTDSPL	O15194	276 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	LY86	O95711	162 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	PDGFA	P04085	211 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	WNT5A	P41221	380 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	OR5M8	Q8NGP6	311 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	OR9G1	Q8NH87	305 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	TAAR5	O14804	337 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	GSTZ1	O43708	216 aa	Predicted RBP	13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	PLA2G5	P39877	138 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	H3F3A	P84243	136 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SURF2	Q15527	256 aa	Predicted RBP	13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	C17orf50	Q8WW18	174 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SLC25A15	Q9Y619	301 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	BMI1	P35226	326 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	LIAT1	Q6ZQX7	453 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504	IL36RN	Q9UBH0	155 aa		13.35	□□□□□ -0.27
PPFIA1-222	ENST00000532504		A0A087WV48	116 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A10P	A6NDY2	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A18P	A6NE21	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A16P	A6NEW6	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A20P	A6NIJ5	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A8P	A6NJQ4	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A7P	A6NKC0	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A22P	A8MWA6	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A12P	A8MX19	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A5P	A8MXJ8	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A23P	A8MXZ1	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A15P	P0C7V4	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A13P	P0C7W8	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A14P	P0C7W9	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	FAM90A24P	P0C7X0	464 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	UBE2G2	P60604	165 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	NCR3LG1	Q68D85	454 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ZNF788	Q6ZQV5	615 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	LYZL2	Q7Z4W2	148 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SAT2	Q96F10	170 aa	Predicted RBP	13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	PRND	Q9UKY0	176 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	DOCK7	Q96N67	2140 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	VDAC1	P21796	283 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ZNF260	Q3ZCT1	412 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	OR10Z1	Q8NGY1	313 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	RGP1	Q92546	391 aa	Predicted RBP	13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	MALSU1	Q96EH3	234 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	MED9	Q9NWA0	146 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	HAGH	Q16775	308 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ZBTB34	Q8NCN2	500 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	OR5C1	Q8NGR4	320 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	GON7	Q9BXV9	100 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504		A0A1W2PNU3	283 aa	Predicted RBP	13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	CLEC9A	Q6UXN8	241 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	OR1L8	Q8NGR8	309 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	SUN5	Q8TC36	379 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	DTD1	Q8TEA8	209 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	NEUROG1	Q92886	237 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504	ZNF319	Q9P2F9	582 aa		13.34	□□□□□ -0.27
PPFIA1-222	ENST00000532504		A0A1B0GTI1	187 aa		13.33	□□□□□ -0.27
PPFIA1-222	ENST00000532504		J3QR06	171 aa		13.33	□□□□□ -0.27
PPFIA1-222	ENST00000532504	UQCRFS1	P47985	274 aa		13.33	□□□□□ -0.27
PPFIA1-222	ENST00000532504	UNQ9370/PRO34162	Q6UXP9	181 aa		13.33	□□□□□ -0.27
PPFIA1-222	ENST00000532504	PITPNC1	Q9UKF7	332 aa		13.33	□□□□□ -0.27

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