RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 OR13C5Q8NGS8 318 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 GHSRQ92847 366 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 MUL1Q969V5 352 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 RDH12Q96NR8 316 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 YPEL2Q96QA6 119 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 ABHD14AQ9BUJ0 271 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 MRPL20Q9BYC9 149 aaKnown RBP11.52□□□□□ -0.57
CAPN1-219ENST00000530495 CST11Q9H112 138 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 KCNIP1Q9NZI2 227 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 CKLFQ9UBR5 152 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 JPT1Q9UK76 154 aa11.52□□□□□ -0.57
CAPN1-219ENST00000530495 TRAV8-7A0A075B6U6 113 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 TRIM64CA6NLI5 447 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 WBP4O75554 376 aaKnown RBP11.51□□□□□ -0.57
CAPN1-219ENST00000530495 LGALS1P09382 135 aaKnown RBP11.51□□□□□ -0.57
CAPN1-219ENST00000530495 PPP1CCP36873 323 aaKnown RBP11.51□□□□□ -0.57
CAPN1-219ENST00000530495 RPS11P62280 158 aaKnown RBP eCLIP11.51□□□□□ -0.57
CAPN1-219ENST00000530495 SMN1Q16637 294 aaKnown RBP11.51□□□□□ -0.57
CAPN1-219ENST00000530495 Q499Y3 187 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 DMKNQ6E0U4 476 aaPredicted RBP11.51□□□□□ -0.57
CAPN1-219ENST00000530495 SIGIRRQ6IA17 410 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 ZFP1Q6P2D0 407 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 C5orf24Q7Z6I8 188 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 CDH26Q8IXH8 852 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 SLC29A1Q99808 456 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 TM2D3Q9BRN9 247 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 SELENOIQ9C0D9 397 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 BANF2Q9H503 90 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 GAR1Q9NY12 217 aaKnown RBP11.51□□□□□ -0.57
CAPN1-219ENST00000530495 KIAA1456Q9P272 454 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 FBXO7Q9Y3I1 522 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 NUBP2Q9Y5Y2 271 aa11.51□□□□□ -0.57
CAPN1-219ENST00000530495 IGHV4OR15-8A0A075B7B6 117 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 A0A087WW49 117 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 A0A1W2PN81 502 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 UBE2QL1A1L167 161 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 LALBAP00709 142 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 OR8U9P0C7N5 309 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 EGR2P11161 476 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-219ENST00000530495 MGMTP16455 207 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 FSTP19883 344 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 CHRNA7P36544 502 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 OR3A3P47888 321 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 DOC2BQ14184 412 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 YIF1BQ5BJH7 314 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 LYPD6Q86Y78 171 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 JAGN1Q8N5M9 183 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 TCTEX1D1Q8N7M0 179 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 MRPL30Q8TCC3 161 aaKnown RBP11.5□□□□□ -0.57
CAPN1-219ENST00000530495 ARPC1AQ92747 370 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 C9orf16Q9BUW7 83 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 FOXA2Q9Y261 457 aaPredicted RBP11.5□□□□□ -0.57
CAPN1-219ENST00000530495 LRRC42Q9Y546 428 aa11.5□□□□□ -0.57
CAPN1-219ENST00000530495 HUWE1Q7Z6Z7 4374 aaKnown RBP11.49□□□□□ -0.57
CAPN1-219ENST00000530495 SAA2-SAA4A0A096LPE2 208 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 TRBV5-7A0A0A0MS05 114 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 A8MZ25 164 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 LDLRAD4O15165 306 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 RGS11O94810 467 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 MAS1P04201 325 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 HSPB1P04792 205 aaKnown RBP11.49□□□□□ -0.57
CAPN1-219ENST00000530495 SAA2P0DJI9 122 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-219ENST00000530495 CX3CL1P78423 397 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 NDPQ00604 133 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 TMEM267Q0VDI3 215 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-219ENST00000530495 ECSCRQ19T08 205 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 AWAT2Q6E213 333 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 CD200R1LQ6Q8B3 271 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 Q8N1Y9 231 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 CASTOR1Q8WTX7 329 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 GALMQ96C23 342 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 FLYWCH2Q96CP2 140 aaKnown RBP11.49□□□□□ -0.57
CAPN1-219ENST00000530495 CYYR1Q96J86 154 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 Q96M66 194 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 OR4C12Q96R67 309 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 RYR2Q92736 4967 aa11.49□□□□□ -0.57
CAPN1-219ENST00000530495 IRGMA1A4Y4 181 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 FCN1O00602 326 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 RRHO14718 337 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 ARPC1BO15143 372 aaKnown RBP11.48□□□□□ -0.57
CAPN1-219ENST00000530495 CRTAPO75718 401 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-219ENST00000530495 PITPNAQ00169 270 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 AKIRIN2Q53H80 203 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 ZFAND6Q6FIF0 208 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 PYHIN1Q6K0P9 492 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 PGLYRP3Q96LB9 341 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 OR14A2Q96R54 314 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 IFI27L2Q9H2X8 130 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 FBXL15Q9H469 300 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 EDA2RQ9HAV5 297 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 C19orf73Q9NVV2 129 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 CLEC2DQ9UHP7 191 aa11.48□□□□□ -0.57
CAPN1-219ENST00000530495 DIMT1Q9UNQ2 313 aaKnown RBP11.48□□□□□ -0.57
CAPN1-219ENST00000530495 EXOSC1Q9Y3B2 195 aaKnown RBP11.48□□□□□ -0.57
CAPN1-219ENST00000530495 A0A1W2PPK0 400 aa11.47□□□□□ -0.57
CAPN1-219ENST00000530495 PDCD6O75340 191 aa11.47□□□□□ -0.57
CAPN1-219ENST00000530495 IGHV4-30-4P0DP06 118 aa11.47□□□□□ -0.57
CAPN1-219ENST00000530495 MYL12AP19105 171 aa11.47□□□□□ -0.57
CAPN1-219ENST00000530495 MC5RP33032 325 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms