RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 RAMP3O60896 148 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 RGS11O94810 467 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 IGHG4P01861 327 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 GLAP06280 429 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 OR5H8P0DN80 308 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 ZNF137PP52743 207 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 ZNF260Q3ZCT1 412 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 ACSM3Q53FZ2 586 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 RBM48Q5RL73 367 aaKnown RBP10.16□□□□□ -0.78
CPSF1-204ENST00000529288 STEAP3Q658P3 488 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 GAPTQ8N292 157 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 GALMQ96C23 342 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 ASCL2Q99929 193 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 NABP2Q9BQ15 211 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 SULT4A1Q9BR01 284 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 UQCC2Q9BRT2 126 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 KLK15Q9H2R5 256 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 ABRACLQ9P1F3 81 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 KIAA1456Q9P272 454 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 JPT1Q9UK76 154 aa10.16□□□□□ -0.78
CPSF1-204ENST00000529288 PTGES3LE9PB15 166 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 ATP6V0E1O15342 81 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 SC5DO75845 299 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 IGF1P05019 195 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 CFHR3Q02985 330 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 FAM27D1Q5T7N8 215 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 GLT8D1Q68CQ7 371 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 C6orf201Q7Z4U5 140 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 NANOGP1Q8N7R0 232 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 OR2AK2Q8NG84 335 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 OR1N2Q8NGR9 330 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 ABHD5Q8WTS1 349 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 C4orf3Q8WVX3 66 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 THRSPQ92748 146 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 WWC2-AS2Q96NR7 200 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 ANKRD60Q9BZ19 345 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 OR51J1Q9H342 316 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 KCNK15Q9H427 330 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 GNB4Q9HAV0 340 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 MBNL3Q9NUK0 354 aaKnown RBP10.15□□□□□ -0.78
CPSF1-204ENST00000529288 GHRLQ9UBU3 117 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 STEAP1Q9UHE8 339 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 A3GALT2U3KPV4 340 aa10.15□□□□□ -0.78
CPSF1-204ENST00000529288 TRAV41A0A0B4J266 112 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 NBR2O15453 112 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 ST8SIA5O15466 376 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 YPEL1O60688 119 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 ATP6V1G2O95670 118 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 CD1AP06126 327 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 PSMB8P28062 276 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 BLVRBP30043 206 aaPredicted RBP10.14□□□□□ -0.79
CPSF1-204ENST00000529288 HTD2P86397 168 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 PLGLAQ15195 96 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 ECSCRQ19T08 205 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 C6orf141Q5SZD1 244 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 LIN54Q6MZP7 749 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 CEACAM19Q7Z692 300 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 LYPD6Q86Y78 171 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 ODF3L1Q8IXM7 274 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 RNF152Q8N8N0 203 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 YPEL2Q96QA6 119 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 TMEM59Q9BXS4 323 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 VSIG4Q9Y279 399 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 LRRC42Q9Y546 428 aa10.14□□□□□ -0.79
CPSF1-204ENST00000529288 SAA2-SAA4A0A096LPE2 208 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 IGHV7-81A0A0B4J1V7 117 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 CDK1P06493 297 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 UBBP0CG47 229 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 SAA2P0DJI9 122 aaPredicted RBP10.13□□□□□ -0.79
CPSF1-204ENST00000529288 CHATP28329 748 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 HTR2CP28335 458 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 RPS27AP62979 156 aaKnown RBP10.13□□□□□ -0.79
CPSF1-204ENST00000529288 C5orf64Q2M2E5 130 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 HSD17B12Q53GQ0 312 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 RPL39P5Q59GN2 51 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 RNLSQ5VYX0 342 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 FAM131AQ6UXB0 335 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 IZUMO2Q6UXV1 221 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 GLDNQ6ZMI3 551 aaPredicted RBP10.13□□□□□ -0.79
CPSF1-204ENST00000529288 ZNF833PQ6ZTB9 187 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 ZNF554Q86TJ5 538 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 LRRTM1Q86UE6 522 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 MS4A15Q8N5U1 240 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 ZNF491Q8N8L2 437 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 CASTOR1Q8WTX7 329 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 CLCC1Q96S66 551 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 NICN1Q9BSH3 213 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 MND1Q9BWT6 205 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 FBXL15Q9H469 300 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 PLEKHJ1Q9NW61 149 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 SCOCQ9UIL1 159 aa10.13□□□□□ -0.79
CPSF1-204ENST00000529288 LSM2Q9Y333 95 aaKnown RBP10.13□□□□□ -0.79
CPSF1-204ENST00000529288 A0A1W2PN81 502 aa10.12□□□□□ -0.79
CPSF1-204ENST00000529288 H7C2Y5 167 aa10.12□□□□□ -0.79
CPSF1-204ENST00000529288 HLA-DRB1P01911 266 aa10.12□□□□□ -0.79
CPSF1-204ENST00000529288 GSTP1P09211 210 aaKnown RBP10.12□□□□□ -0.79
CPSF1-204ENST00000529288 OR8U8P0C7N1 319 aa10.12□□□□□ -0.79
CPSF1-204ENST00000529288 NHLRC4P0CG21 123 aaPredicted RBP10.12□□□□□ -0.79
CPSF1-204ENST00000529288 PPIFP30405 207 aaKnown RBP10.12□□□□□ -0.79
CPSF1-204ENST00000529288 CHRNA7P36544 502 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms