RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 LPAR5Q9H1C0 372 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 SRMSQ9H3Y6 488 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 POPDC3Q9HBV1 291 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 SH2D2AQ9NP31 389 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 SAR1AQ9NR31 198 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 RBFOX1Q9NWB1 397 aaKnown RBP2.44□□□□□ -2.02
CD44-229ENST00000528672 MRPL16Q9NX20 251 aaKnown RBP2.44□□□□□ -2.02
CD44-229ENST00000528672 MARCH5Q9NX47 278 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 SCN3BQ9NY72 215 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 SPANXCQ9NY87 97 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 NAT8BQ9UHF3 227 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 CES1P1Q9UKY3 287 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 LAMTOR2Q9Y2Q5 125 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 LSM5Q9Y4Y9 91 aaKnown RBP2.44□□□□□ -2.02
CD44-229ENST00000528672 SNX10Q9Y5X0 201 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 ZNF780BQ9Y6R6 833 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 RALGAPA1Q6GYQ0 2036 aa2.44□□□□□ -2.02
CD44-229ENST00000528672 RTEL1-TNFRSF6BF6WH68 1400 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 DAPK1P53355 1430 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 NAIPQ13075 1403 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 TRAV36DV7A0A075B6V5 113 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 TRAV38-1A0A0B4J264 116 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 A0A0G2JLM5 398 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 LOC100130705A0A1B0GUX0 176 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 A0A1B0GX51 115 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 LYRM9A8MSI8 78 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 F6UB75 175 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 TNFRSF11BO00300 401 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 UPK1AO00322 258 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 CRXO43186 299 aaPredicted RBP2.43□□□□□ -2.02
CD44-229ENST00000528672 ZNF207O43670 478 aaKnown RBP2.43□□□□□ -2.02
CD44-229ENST00000528672 KCNK2O95069 426 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 KLF8O95600 359 aaPredicted RBP2.43□□□□□ -2.02
CD44-229ENST00000528672 LSM8O95777 96 aaKnown RBP2.43□□□□□ -2.02
CD44-229ENST00000528672 NRASP01111 189 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 HBZP02008 142 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 GYPCP04921 128 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 SMIM17P0DL12 118 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 USF1P22415 310 aaPredicted RBP2.43□□□□□ -2.02
CD44-229ENST00000528672 RPS3P23396 243 aaKnown RBP eCLIP2.43□□□□□ -2.02
CD44-229ENST00000528672 PRTN3P24158 256 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 NPY1RP25929 384 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 S100A2P29034 98 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 CMPK1P30085 196 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 BTCP35070 178 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 KRTAP10-12P60413 245 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 CLINT1Q14677 625 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 KIAA0040Q15053 153 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 PMVKQ15126 192 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 RHEBQ15382 184 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 ACOT6Q3I5F7 207 aaPredicted RBP2.43□□□□□ -2.02
CD44-229ENST00000528672 MORN2Q502X0 79 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 KDM4DQ6B0I6 523 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 HBMQ6B0K9 141 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 TNFAIP8L2Q6P589 184 aaPredicted RBP2.43□□□□□ -2.02
CD44-229ENST00000528672 WDR59Q6PJI9 974 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 EPGNQ6UW88 154 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 FBXW12Q6X9E4 464 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 Q6ZSR6 202 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 RASSF6Q6ZTQ3 369 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 SLC35E3Q7Z769 313 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 TMEM179BQ7Z7N9 219 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 OAFQ86UD1 273 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 GPD1LQ8N335 351 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 ZNF664Q8N3J9 261 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 SPICQ8N5J4 248 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 FAM24BQ8N5W8 94 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 ZNF525Q8N782 197 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 TCTEX1D1Q8N7M0 179 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 ZNF740Q8NDX6 193 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 OR1N2Q8NGR9 330 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 OR2K2Q8NGT1 345 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 OR5W2Q8NH69 310 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 ZNF418Q8TF45 676 aaPredicted RBP2.43□□□□□ -2.02
CD44-229ENST00000528672 FAM151AQ8WW52 585 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 DCUN1D4Q92564 292 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 RDH5Q92781 318 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 TMEM159Q96B96 161 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 PPCDCQ96CD2 204 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 TMEM101Q96IK0 257 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 TEX37Q96LM6 180 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 OR52B2Q96RD2 323 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 GPER1Q99527 375 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 MGLLQ99685 303 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 NRTNQ99748 197 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 PDCD1LG2Q9BQ51 273 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 NRIP2Q9BQI9 281 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 AGMATQ9BSE5 352 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 DEFB126Q9BYW3 111 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 SLC25A39Q9BZJ4 359 aaPredicted RBP2.43□□□□□ -2.02
CD44-229ENST00000528672 C20orf27Q9GZN8 174 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 Q9H521 79 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 SLC25A22Q9H936 323 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 KCNJ16Q9NPI9 418 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 RPS10P5Q9NQ39 176 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 GPR84Q9NQS5 396 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 UBQLN4Q9NRR5 601 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 CISHQ9NSE2 258 aa2.43□□□□□ -2.02
CD44-229ENST00000528672 MRPL27Q9P0M9 148 aaKnown RBP2.43□□□□□ -2.02
CD44-229ENST00000528672 Q9UF83 564 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms