RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 STARD4Q96DR4 205 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 C14orf79Q96F83 325 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 THYN1Q9P016 225 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 FBXL17Q9UF56 701 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 C1orf196B1AJZ1 125 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 WNT9BO14905 357 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 ASPHD2Q6ICH7 369 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 LILRB1Q8NHL6 650 aaPredicted RBP12.85□□□□□ -0.35
USP47-207ENST00000527733 GHITMQ9H3K2 345 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 PRNDQ9UKY0 176 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 A0A087WV48 116 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 GLIPR1P48060 266 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 ZNF561Q8N587 486 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 MIOXQ9UGB7 285 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 NUPL2O15504 423 aaKnown RBP12.85□□□□□ -0.35
USP47-207ENST00000527733 CD300CQ08708 224 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 ATP6V1FQ16864 119 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 OVCH2Q7RTZ1 564 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 DTD1Q8TEA8 209 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 ABHD14BQ96IU4 210 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 CLCF1Q9UBD9 225 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 COX7A2P2O60397 106 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 P2RY1P47900 373 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 P2RX3P56373 397 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 TMEM33P57088 247 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 HAGHQ16775 308 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 TCTEX1D1Q8N7M0 179 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 POC1AQ8NBT0 407 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 FRZBQ92765 325 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 MISP3Q96FF7 219 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 RSPO3Q9BXY4 272 aaPredicted RBP12.84□□□□□ -0.35
USP47-207ENST00000527733 MED9Q9NWA0 146 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 G6PCP35575 357 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 ZNF66Q6ZN08 573 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 ACP7Q6ZNF0 438 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 LYZL4Q96KX0 146 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 MTCH1Q9NZJ7 389 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 KPTNQ9Y664 436 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 PIEZO1Q92508 2521 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 CD74P04233 296 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 OR13C7P0DN81 318 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 M6PRP20645 277 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 ATP5J2P56134 94 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 NR2C2APQ86WQ0 139 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 TMEM106BQ9NUM4 274 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 OTOGLQ3ZCN5 2332 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 HEATR5AQ86XA9 2040 aa12.84□□□□□ -0.35
USP47-207ENST00000527733 IGKV1-9A0A0C4DH69 117 aa12.83□□□□□ -0.35
USP47-207ENST00000527733 PQLC2LA1A4F0 135 aa12.83□□□□□ -0.35
USP47-207ENST00000527733 MELTFP08582 738 aa12.83□□□□□ -0.35
USP47-207ENST00000527733 REG1BP48304 166 aa12.83□□□□□ -0.35
USP47-207ENST00000527733 PLAC9Q5JTB6 97 aa12.83□□□□□ -0.35
USP47-207ENST00000527733 AKAP6Q13023 2319 aa12.83□□□□□ -0.35
USP47-207ENST00000527733 MBD3L4A6NDZ8 208 aaPredicted RBP12.83□□□□□ -0.36
USP47-207ENST00000527733 MBD3L3A6NE82 208 aaPredicted RBP12.83□□□□□ -0.36
USP47-207ENST00000527733 MBD3L5A6NJ08 208 aaPredicted RBP12.83□□□□□ -0.36
USP47-207ENST00000527733 TMEM50BP56557 158 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 ESPL1Q14674 2120 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 SLC35E4Q6ICL7 350 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 MBD3L2Q8NHZ7 208 aaPredicted RBP12.83□□□□□ -0.36
USP47-207ENST00000527733 HPRT1P00492 218 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 MMP7P09237 267 aaPredicted RBP12.83□□□□□ -0.36
USP47-207ENST00000527733 TAGLNQ01995 201 aaKnown RBP12.83□□□□□ -0.36
USP47-207ENST00000527733 KCNIP4Q6PIL6 250 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 PROK2Q9HC23 129 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 IDI2-AS1Q9NZ38 188 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 DOCK7Q96N67 2140 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 IGHV1-18A0A0C4DH31 117 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 MDFIC2A0A1B0GVS7 189 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 C17orf100A8MU93 164 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 H0Y980 276 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 HIST3H3Q16695 136 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 C1QTNF12Q5T7M4 302 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 ZNRF1Q8ND25 227 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 JPT1Q9UK76 154 aa12.83□□□□□ -0.36
USP47-207ENST00000527733 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.82□□□□□ -0.36
USP47-207ENST00000527733 CSN1S1P47710 185 aa12.82□□□□□ -0.36
USP47-207ENST00000527733 FHL1Q13642 323 aa12.82□□□□□ -0.36
USP47-207ENST00000527733 TMEM147Q9BVK8 224 aa12.82□□□□□ -0.36
USP47-207ENST00000527733 FBLN5Q9UBX5 448 aa12.82□□□□□ -0.36
USP47-207ENST00000527733 ZNF729A6NN14 1252 aaPredicted RBP12.82□□□□□ -0.36
USP47-207ENST00000527733 TMEM30BQ3MIR4 351 aa12.82□□□□□ -0.36
USP47-207ENST00000527733 ACSM6Q6P461 480 aa12.82□□□□□ -0.36
USP47-207ENST00000527733 PLXNB3Q9ULL4 1909 aa12.82□□□□□ -0.36
USP47-207ENST00000527733 GAPDHP04406 335 aaKnown RBP12.82□□□□□ -0.36
USP47-207ENST00000527733 ADIRFQ15847 76 aa12.82□□□□□ -0.36
USP47-207ENST00000527733 IGFL3Q6UXB1 125 aa12.82□□□□□ -0.36
USP47-207ENST00000527733 TMEM222Q9H0R3 208 aa12.82□□□□□ -0.36
USP47-207ENST00000527733 H0YL77 283 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 CRYBA1P05813 215 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 ZNF645Q8N7E2 425 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 SLC2A8Q9NY64 477 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 POMT1Q9Y6A1 747 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 PPIAL4CA0A0B4J2A2 164 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 RBP4P02753 201 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 PPIAL4GP0DN37 164 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 MC5RP33032 325 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 MMDQ15546 238 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 RASL11BQ9BPW5 248 aa12.81□□□□□ -0.36
USP47-207ENST00000527733 OR1L8Q8NGR8 309 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms