RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 OR8U1Q8NH10 309 aa16.96■□□□□ 0.31
SMCO4-203ENST00000526869 RFESDQ8TAC1 157 aa16.96■□□□□ 0.31
SMCO4-203ENST00000526869 PARP12Q9H0J9 701 aaKnown RBP16.96■□□□□ 0.31
SMCO4-203ENST00000526869 GAL3ST2Q9H3Q3 398 aa16.96■□□□□ 0.31
SMCO4-203ENST00000526869 PLEKHF2Q9H8W4 249 aa16.96■□□□□ 0.31
SMCO4-203ENST00000526869 MIOXQ9UGB7 285 aa16.96■□□□□ 0.31
SMCO4-203ENST00000526869 RBM7Q9Y580 266 aaKnown RBP16.96■□□□□ 0.31
SMCO4-203ENST00000526869 KIAA2026Q5HYC2 2103 aa16.96■□□□□ 0.3
SMCO4-203ENST00000526869 CHD6Q8TD26 2715 aa16.95■□□□□ 0.3
SMCO4-203ENST00000526869 H0Y980 276 aa16.95■□□□□ 0.3
SMCO4-203ENST00000526869 PGLYRP1O75594 196 aaPredicted RBP16.95■□□□□ 0.3
SMCO4-203ENST00000526869 SIX6O95475 246 aa16.95■□□□□ 0.3
SMCO4-203ENST00000526869 GSG1LQ6UXU4 331 aa16.95■□□□□ 0.3
SMCO4-203ENST00000526869 LGI3Q8N145 548 aa16.95■□□□□ 0.3
SMCO4-203ENST00000526869 TMEM222Q9H0R3 208 aa16.95■□□□□ 0.3
SMCO4-203ENST00000526869 GFOD1Q9NXC2 390 aa16.95■□□□□ 0.3
SMCO4-203ENST00000526869 IDI2-AS1Q9NZ38 188 aa16.95■□□□□ 0.3
SMCO4-203ENST00000526869 GNG12Q9UBI6 72 aa16.95■□□□□ 0.3
SMCO4-203ENST00000526869 FAM208BQ5VWN6 2430 aa16.95■□□□□ 0.3
SMCO4-203ENST00000526869 RNF212BA8MTL3 300 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 G3V3Q6 166 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 SMLR1H3BR10 107 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 IGLV2-14P01704 120 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 DNASE1P24855 282 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 F2RP25116 425 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 CDKN1AP38936 164 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 CYCSP99999 105 aaKnown RBP16.94■□□□□ 0.3
SMCO4-203ENST00000526869 MORN2Q502X0 79 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 FGFRL1Q8N441 504 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 GLYATL2Q8WU03 294 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 MSI2Q96DH6 328 aaKnown RBP16.94■□□□□ 0.3
SMCO4-203ENST00000526869 C19orf12Q9NSK7 152 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 KCNS2Q9ULS6 477 aa16.94■□□□□ 0.3
SMCO4-203ENST00000526869 LRBAP50851 2863 aa16.93■□□□□ 0.3
SMCO4-203ENST00000526869 CCSO14618 274 aa16.93■□□□□ 0.3
SMCO4-203ENST00000526869 PHF1O43189 567 aaPredicted RBP16.93■□□□□ 0.3
SMCO4-203ENST00000526869 PPIHO43447 177 aaKnown RBP16.93■□□□□ 0.3
SMCO4-203ENST00000526869 UCP1P25874 307 aa16.93■□□□□ 0.3
SMCO4-203ENST00000526869 DRAM1Q8N682 238 aa16.93■□□□□ 0.3
SMCO4-203ENST00000526869 IL22RA2Q969J5 263 aa16.93■□□□□ 0.3
SMCO4-203ENST00000526869 NEIL1Q96FI4 390 aaPredicted RBP16.93■□□□□ 0.3
SMCO4-203ENST00000526869 TMEM56Q96MV1 263 aa16.93■□□□□ 0.3
SMCO4-203ENST00000526869 TP53RKQ96S44 253 aa16.93■□□□□ 0.3
SMCO4-203ENST00000526869 OR2D2Q9H210 308 aa16.93■□□□□ 0.3
SMCO4-203ENST00000526869 TMEM56-RWDD3S4R434 201 aa16.93■□□□□ 0.3
SMCO4-203ENST00000526869 IGHV3-43A0A0B4J1X8 118 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 DUXBA0A1W2PPF3 345 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 SNAPC5O75971 98 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 IFNA21P01568 189 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 IGHV3-43DP0DP04 118 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 COX6B1P14854 86 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 RAB7AP51149 207 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 FGL1Q08830 312 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 Q3ZCU0 254 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 AVPI1Q5T686 147 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 TMEM200BQ69YZ2 307 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 ZNF841Q6ZN19 808 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 OR8B3Q8NGG8 313 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 H1FXQ92522 213 aaKnown RBP16.92■□□□□ 0.3
SMCO4-203ENST00000526869 C18orf12Q96KH6 178 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 ZNF714Q96N38 554 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 OR8B2Q96RD0 313 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 PDCD10Q9BUL8 212 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 NMES1Q9C002 83 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 METTL8Q9H825 291 aaKnown RBP16.92■□□□□ 0.3
SMCO4-203ENST00000526869 LIN7CQ9NUP9 197 aaKnown RBP16.92■□□□□ 0.3
SMCO4-203ENST00000526869 PRR13Q9NZ81 148 aa16.92■□□□□ 0.3
SMCO4-203ENST00000526869 RPUSD1Q9UJJ7 312 aaKnown RBP16.92■□□□□ 0.3
SMCO4-203ENST00000526869 RALYQ9UKM9 306 aaKnown RBP16.92■□□□□ 0.3
SMCO4-203ENST00000526869 MEX3AA1L020 520 aaKnown RBP16.91■□□□□ 0.3
SMCO4-203ENST00000526869 C5orf51A6NDU8 294 aa16.91■□□□□ 0.3
SMCO4-203ENST00000526869 ADAP1O75689 374 aa16.91■□□□□ 0.3
SMCO4-203ENST00000526869 LY6HO94772 140 aa16.91■□□□□ 0.3
SMCO4-203ENST00000526869 NKX2-5P52952 324 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-203ENST00000526869 EIF4EBP1Q13541 118 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-203ENST00000526869 ZNF273Q14593 569 aa16.91■□□□□ 0.3
SMCO4-203ENST00000526869 SP6Q3SY56 376 aa16.91■□□□□ 0.3
SMCO4-203ENST00000526869 HEPN1Q6WQI6 88 aa16.91■□□□□ 0.3
SMCO4-203ENST00000526869 TCTEX1D1Q8N7M0 179 aa16.91■□□□□ 0.3
SMCO4-203ENST00000526869 DRAXINQ8NBI3 349 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-203ENST00000526869 RAB39BQ96DA2 213 aa16.91■□□□□ 0.3
SMCO4-203ENST00000526869 AGMATQ9BSE5 352 aa16.91■□□□□ 0.3
SMCO4-203ENST00000526869 FAM212BQ9NTI7 297 aaPredicted RBP16.91■□□□□ 0.3
SMCO4-203ENST00000526869 GAB2Q9UQC2 676 aa16.91■□□□□ 0.3
SMCO4-203ENST00000526869 LRRK2Q5S007 2527 aa16.9■□□□□ 0.3
SMCO4-203ENST00000526869 FAM25EA8MYX2 175 aa16.9■□□□□ 0.3
SMCO4-203ENST00000526869 F5H0A9 414 aaPredicted RBP16.9■□□□□ 0.3
SMCO4-203ENST00000526869 CDS2O95674 445 aa16.9■□□□□ 0.3
SMCO4-203ENST00000526869 LTC4SQ16873 150 aa16.9■□□□□ 0.3
SMCO4-203ENST00000526869 FAM53AQ6NSI3 398 aaPredicted RBP16.9■□□□□ 0.3
SMCO4-203ENST00000526869 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.9■□□□□ 0.3
SMCO4-203ENST00000526869 C8orf46Q8TAG6 207 aa16.9■□□□□ 0.3
SMCO4-203ENST00000526869 WDR89Q96FK6 387 aaPredicted RBP16.9■□□□□ 0.3
SMCO4-203ENST00000526869 C2orf50Q96LR7 162 aa16.9■□□□□ 0.3
SMCO4-203ENST00000526869 PSG11Q9UQ72 335 aa16.9■□□□□ 0.3
SMCO4-203ENST00000526869 TMED3Q9Y3Q3 217 aa16.9■□□□□ 0.3
SMCO4-203ENST00000526869 TNFSF12O43508 249 aa16.89■□□□□ 0.29
SMCO4-203ENST00000526869 CLDN1O95832 211 aa16.89■□□□□ 0.29
SMCO4-203ENST00000526869 HOXB5P09067 269 aa16.89■□□□□ 0.29
SMCO4-203ENST00000526869 GPR6P46095 362 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms