RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 OR8G5Q8NG78 346 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 OR10D3Q8NH80 312 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 PRR14LQ5THK1 2151 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 CEP192Q8TEP8 1941 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 CD300LBA8K4G0 201 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 PFN1P07737 140 aaKnown RBP11.19□□□□□ -0.62
CAPN1-202ENST00000524773 UMODP07911 640 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 UBE2G2P60604 165 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 TEX38Q6PEX7 206 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-202ENST00000524773 OR5D13Q8NGL4 314 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 OR10J5Q8NHC4 309 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 GUCD1Q96NT3 240 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 VAX2Q9UIW0 290 aa11.19□□□□□ -0.62
CAPN1-202ENST00000524773 MED12LQ86YW9 2145 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 ZNF716A6NP11 495 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 H0Y980 276 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 VAMP5O95183 116 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 OPN1MWP04001 364 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 OPN1MW2P0DN77 364 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 OPN1MW3P0DN78 364 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 FGF7P21781 194 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 OR8B8Q15620 311 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 BSXQ3C1V8 233 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 MRPL30Q8TCC3 161 aaKnown RBP11.18□□□□□ -0.62
CAPN1-202ENST00000524773 PARLQ9H300 379 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 GPR35Q9HC97 309 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 CLN8Q9UBY8 286 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 ADAMTS20P59510 1910 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 TRBV24-1A0A075B6N3 115 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 A6NNC1 897 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 PPP5D1E7EU14 171 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 H7BYZ3 331 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 DFFBO76075 338 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 CLDN1O95832 211 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 CXCL12P48061 93 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 NUBP1P53384 320 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 RAC1P63000 192 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 TMEM241Q24JQ0 296 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 TCF23Q7RTU1 214 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 FAM185AQ8N0U4 392 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 TMEM256Q8N2U0 113 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 CLDN23Q96B33 292 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 ADGRG7Q96K78 797 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 PRDM6Q9NQX0 595 aa11.18□□□□□ -0.62
CAPN1-202ENST00000524773 B4DEV8 164 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 TRAPPC2LH3BP13 241 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 SIRPB1O00241 398 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 SCGB1D1O95968 90 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 IGLV2-14P01704 120 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 SSR4P51571 173 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 GCSAMLQ5JQS6 135 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 GGNQ86UU5 652 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 DERL1Q9BUN8 251 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 ATP23Q9Y6H3 246 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 TRAV24A0A0B4J272 114 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 TOX3O15405 576 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-202ENST00000524773 RAMP3O60896 148 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 KRASP01116 189 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 MEF2BQ02080 365 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-202ENST00000524773 TFF3Q07654 80 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 CST9LP1Q5W188 147 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 ZNF324BQ6AW86 544 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-202ENST00000524773 RPS19BP1Q86WX3 136 aaKnown RBP11.17□□□□□ -0.62
CAPN1-202ENST00000524773 ZNF808Q8N4W9 903 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-202ENST00000524773 PSMF1Q92530 271 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 SNHG12Q9BXW3 62 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 SIT1Q9Y3P8 196 aa11.17□□□□□ -0.62
CAPN1-202ENST00000524773 IGHV1-45A0A0A0MS14 117 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 PAGE4O60829 102 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 CEBPDP49716 269 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-202ENST00000524773 ARF1P84077 181 aaKnown RBP11.16□□□□□ -0.62
CAPN1-202ENST00000524773 ZNF816Q0VGE8 651 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-202ENST00000524773 BTNL3Q6UXE8 466 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 DEFB123Q8N688 67 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 SNIP1Q8TAD8 396 aaKnown RBP11.16□□□□□ -0.62
CAPN1-202ENST00000524773 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 SRD5A3Q9H8P0 318 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 IL36GQ9NZH8 169 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 C19orf25Q9UFG5 118 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-202ENST00000524773 OR2W1Q9Y3N9 320 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 CLEC18AA5D8T8 446 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 PINLYPA6NC86 204 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 COX6A1P12074 109 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 B3GALT5-AS1P59052 145 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 RAC3P60763 192 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 FGF12P61328 243 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 PNRC1Q12796 327 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-202ENST00000524773 TDRG1Q3Y452 100 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 ZNF585BQ52M93 769 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 MRPL21Q7Z2W9 205 aaKnown RBP11.16□□□□□ -0.62
CAPN1-202ENST00000524773 CLEC18CQ8NCF0 446 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 OR5R1Q8NH85 324 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 PLPPR2Q96GM1 343 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 WDR61Q9GZS3 305 aaKnown RBP11.16□□□□□ -0.62
CAPN1-202ENST00000524773 NAT8Q9UHE5 227 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 TCFL5Q9UL49 500 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 GRIFINA4D1Z8 144 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 PAX5Q02548 391 aa11.16□□□□□ -0.62
CAPN1-202ENST00000524773 SLC38A11Q08AI6 406 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms