RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-215	ENST00000524111	MRPL30	Q8TCC3	161 aa	Known RBP	7.39	□□□□□ -1.23
SREK1-215	ENST00000524111	RNF122	Q9H9V4	155 aa		7.39	□□□□□ -1.23
SREK1-215	ENST00000524111		A0A1W2PPE2	198 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	CDS2	O95674	445 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	HBZ	P02008	142 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	P2RY1	P47900	373 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	NKX6-1	P78426	367 aa	Predicted RBP	7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	PDZD11	Q5EBL8	140 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	VKORC1L1	Q8N0U8	176 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	SSC4D	Q8WTU2	575 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	RPUSD4	Q96CM3	377 aa	Known RBP	7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	SAT2	Q96F10	170 aa	Predicted RBP	7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	SLC25A22	Q9H936	323 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	SMCO4	Q9NRQ5	59 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	MED9	Q9NWA0	146 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	IGKV1-6	A0A0C4DH72	117 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	CA11	O75493	328 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	KCNJ3	P48549	501 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	ERVK-16	P61578	105 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	UQCC3	Q6UW78	93 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	BHLHA15	Q7RTS1	189 aa	Predicted RBP	7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	PPP1R35	Q8TAP8	253 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	GALNT14	Q96FL9	552 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	RSRP1	Q9BUV0	290 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111		A0A1W2PPH5	198 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	PSPN	O60542	156 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	CST9LP1	Q5W188	147 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111		Q6ZT83	130 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	LRP11	Q86VZ4	500 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	NECAP1	Q8NC96	275 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	GTF3A	Q92664	365 aa	Known RBP	7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	LHX4	Q969G2	390 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	KPTN	Q9Y664	436 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	COL4A2	P08572	1712 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	NOTCH3	Q9UM47	2321 aa		7.38	□□□□□ -1.23
SREK1-215	ENST00000524111	ZNF891	A8MT65	544 aa	Predicted RBP	7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	SELL	P14151	372 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	TLE4	Q04727	773 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	C4orf17	Q53FE4	359 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	DRAM1	Q8N682	238 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	BOD1	Q96IK1	185 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	OR51I2	Q9H344	312 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	MRPS18C	Q9Y3D5	142 aa	Known RBP	7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	LOC105371267	A0A1B0GV96	52 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	CDK2AP1	O14519	115 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	CRYBA1	P05813	215 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	FAM27E3	Q08E93	113 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	ZNF787	Q6DD87	383 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	INO80C	Q6PI98	192 aa	Predicted RBP	7.37	□□□□□ -1.23
SREK1-215	ENST00000524111		Q8IYB0	196 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	MARVELD3	Q96A59	401 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	ENY2	Q9NPA8	101 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	METRN	Q9UJH8	293 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111		A0A0G2JRQ6	117 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	C7orf77	A4D0Y5	90 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	RNF212B	A8MTL3	300 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	C12orf77	C9JDV5	145 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111		C9JQL5	133 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	UBE2G2	P60604	165 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	KIAA0141	Q14154	515 aa	Predicted RBP	7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	GABRA6	Q16445	453 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	OR4A16	Q8NH70	328 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	SPSB4	Q96A44	273 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	OR2V2	Q96R30	315 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	NIPSNAP3B	Q9BS92	247 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	DYNLRB1	Q9NP97	96 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	IL36G	Q9NZH8	169 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	ZFYVE26	Q68DK2	2539 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	DMXL1	Q9Y485	3027 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	ZNF727	A8MUV8	499 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	MKRN2OS	H3BPM6	223 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	DNASE2	O00115	360 aa	Predicted RBP	7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	DFFB	O76075	338 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	COX5B	P10606	129 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	ADCYAP1	P18509	176 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	CCL20	P78556	96 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	IL24	Q13007	206 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	ADIRF	Q15847	76 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	PLA2G2C	Q5R387	149 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	LYG1	Q8N1E2	194 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	UBAC2	Q8NBM4	344 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	S100PBP	Q96BU1	408 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	GNPNAT1	Q96EK6	184 aa	Predicted RBP	7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	CXXC4	Q9H2H0	198 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	WSB1	Q9Y6I7	421 aa		7.37	□□□□□ -1.23
SREK1-215	ENST00000524111	MAP1A	P78559	2803 aa	Predicted RBP	7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	FOXI3	A8MTJ6	420 aa	Predicted RBP	7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	PRR33	A8MZF0	331 aa		7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	PRRG2	O14669	202 aa		7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	OR2C1	O95371	312 aa		7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	FAM157C	P0CG43	387 aa		7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	DEFA4	P12838	97 aa		7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	HNF1A	P20823	631 aa		7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	KIR2DL2	P43627	348 aa	Predicted RBP	7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	KLF3	P57682	345 aa	Predicted RBP	7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	SLC38A11	Q08AI6	406 aa		7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	COLCA1	Q6ZS62	124 aa		7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	FGFRL1	Q8N441	504 aa		7.36	□□□□□ -1.23
SREK1-215	ENST00000524111	CCL17	Q92583	94 aa		7.36	□□□□□ -1.23

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