RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 RFESDQ8TAC1 157 aa15.4■□□□□ 0.06
TRAPPC9-210ENST00000521667 ABHD14BQ96IU4 210 aa15.4■□□□□ 0.06
TRAPPC9-210ENST00000521667 CCL8P80075 99 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 CR1LQ2VPA4 569 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 FBXL19-AS1Q494R0 122 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 SDSLQ96GA7 329 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 PFDN2Q9UHV9 154 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 RNF150Q9ULK6 438 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 SMG1Q96Q15 3661 aaKnown RBP15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 MEX3AA1L020 520 aaKnown RBP15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 FAM90A27PA6NNH2 459 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 SHISA9B4DS77 424 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 GPR137BO60478 399 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 ZNF16P17020 682 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 TMEM33P57088 247 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 EIF5AP63241 154 aaKnown RBP15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 MSMO1Q15800 293 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 AANATQ16613 207 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 GPR157Q5UAW9 335 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 FBXL17Q9UF56 701 aa15.39■□□□□ 0.05
TRAPPC9-210ENST00000521667 IGHV3-43A0A0B4J1X8 118 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 A0A1B0GW55 424 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 IGKV1-39P01597 117 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 IGKV1D-39P04432 117 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 DUX4L2P0CJ85 424 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 DUX4L3P0CJ86 424 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 DUX4L4P0CJ87 422 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 DUX4L5P0CJ88 424 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 DUX4L6P0CJ89 424 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 DUX4L7P0CJ90 424 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 IGHV3-43DP0DP04 118 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 EDDM3BP56851 147 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 TLE1Q04724 770 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 RPL7L1Q6DKI1 246 aaKnown RBP15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 DMRTC2Q8IXT2 367 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 PLPPR2Q96GM1 343 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 NCOR1P1Q9H4R4 102 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 DUX4Q9UBX2 424 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 KALRNO60229 2985 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 TPRP12270 2363 aaKnown RBP15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 A0A0G2JRQ6 117 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 SLC25A6P12236 298 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 MUC1P15941 1255 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 POLR2GP62487 172 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 ZNF585BQ52M93 769 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 CXorf66Q5JRM2 361 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 DEFB108BQ8NET1 73 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 RNASE6Q93091 150 aaKnown RBP15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 GPR146Q96CH1 333 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 REG4Q9BYZ8 158 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 C11orf1Q9H5F2 150 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 SDHAF2Q9NX18 166 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 COQ3Q9NZJ6 369 aa15.38■□□□□ 0.05
TRAPPC9-210ENST00000521667 A0A1B0GU03 582 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 MFSD2BA6NFX1 497 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 LRRC30A6NM36 301 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 SELLP14151 372 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 PVALBP20472 110 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 ID3Q02535 119 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 TOR2AQ5JU69 321 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 FAM209AQ5JX71 171 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 TEX36Q5VZQ5 186 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 TGIF2LYQ8IUE0 185 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 RNASE11Q8TAA1 199 aaKnown RBP15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 LSM10Q969L4 123 aaKnown RBP15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 C14orf79Q96F83 325 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 C5orf30Q96GV9 206 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 GAFA1Q96PS6 74 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 OR6C3Q9NZP0 311 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 NDRG3Q9UGV2 375 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 JPT1Q9UK76 154 aa15.37■□□□□ 0.05
TRAPPC9-210ENST00000521667 E7EQL1 145 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 I3L521 148 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 GAPDHP04406 335 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 EIF4EBP1Q13541 118 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 ZCCHC24Q8N2G6 241 aaKnown RBP15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 ZNF808Q8N4W9 903 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 TMED6Q8WW62 240 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 MARVELD3Q96A59 401 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 SMIM3Q9BZL3 60 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 EGLN1Q9GZT9 426 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 ZNF665Q9H7R5 613 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 DCAF16Q9NXF7 216 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 ACACBO00763 2458 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 DEFB108AA8MXU0 73 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 PITX3O75364 302 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 JTBO76095 146 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 CD3EP07766 207 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 EPHA1P21709 976 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 LTC4SQ16873 150 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 ZNF788Q6ZQV5 615 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 LRRC20Q8TCA0 184 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 EDARADDQ8WWZ3 215 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 FAM234AQ9H0X4 552 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 SAP30LQ9HAJ7 183 aa15.36■□□□□ 0.05
TRAPPC9-210ENST00000521667 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 SSSCA1O60232 199 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 GYPAP02724 150 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 SFTPCP11686 197 aa15.35■□□□□ 0.05
TRAPPC9-210ENST00000521667 AKR1C2P52895 323 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms