RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 A0A1W2PP11 408 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 JTBO76095 146 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 IFNA6P05013 189 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 GABRB1P18505 474 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 RCC1P18754 421 aaPredicted RBP12.6□□□□□ -0.39
TRAM1-204ENST00000521049 GTF2A1P52655 376 aaPredicted RBP12.6□□□□□ -0.39
TRAM1-204ENST00000521049 CX3CL1P78423 397 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 RAB40BQ12829 278 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 ECSCRQ19T08 205 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 CCDC58Q4VC31 144 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 LY6G6FQ5SQ64 297 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 CD200R1LQ6Q8B3 271 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 ZNF554Q86TJ5 538 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 RHOVQ96L33 236 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 ABHD14AQ9BUJ0 271 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 TAF9BQ9HBM6 251 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 MBNL3Q9NUK0 354 aaKnown RBP12.6□□□□□ -0.39
TRAM1-204ENST00000521049 AASSQ9UDR5 926 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 RNF150Q9ULK6 438 aa12.6□□□□□ -0.39
TRAM1-204ENST00000521049 SAC3D1A6NKF1 404 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 YPEL1O60688 119 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 SC5DO75845 299 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 ALPLP05186 524 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 GLAP06280 429 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 EGR2P11161 476 aaPredicted RBP12.59□□□□□ -0.39
TRAM1-204ENST00000521049 HTD2P86397 168 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 NDPQ00604 133 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 HAGHQ16775 308 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 AKIRIN2Q53H80 203 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 RAB12Q6IQ22 244 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 RPL22L1Q6P5R6 122 aaKnown RBP12.59□□□□□ -0.39
TRAM1-204ENST00000521049 ZNF833PQ6ZTB9 187 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 ANKRD13BQ86YJ7 626 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 OR52L2PQ8NGH6 319 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 IL17DQ8TAD2 202 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 CASTOR1Q8WTX7 329 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 Q96MT0 163 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 YPEL2Q96QA6 119 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 MRPS18AQ9NVS2 196 aaKnown RBP12.59□□□□□ -0.39
TRAM1-204ENST00000521049 KCNIP1Q9NZI2 227 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 JPT1Q9UK76 154 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 ORC6Q9Y5N6 252 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 PEX16Q9Y5Y5 336 aa12.59□□□□□ -0.39
TRAM1-204ENST00000521049 EBAG9O00559 213 aa12.58□□□□□ -0.4
TRAM1-204ENST00000521049 IGHV3-11P01762 117 aa12.58□□□□□ -0.4
TRAM1-204ENST00000521049 C1orf146Q5VVC0 180 aa12.58□□□□□ -0.4
TRAM1-204ENST00000521049 ZNF184Q99676 751 aaPredicted RBP12.58□□□□□ -0.4
TRAM1-204ENST00000521049 SLA2Q9H6Q3 261 aa12.58□□□□□ -0.4
TRAM1-204ENST00000521049 AMBNQ9NP70 447 aa12.58□□□□□ -0.4
TRAM1-204ENST00000521049 FAM90A7PA6NKC0 464 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 FAM90A23PA8MXZ1 464 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 FCN1O00602 326 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 RRHO14718 337 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 GPX5O75715 221 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 RGS11O94810 467 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 ARSBP15848 533 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 IGFBP3P17936 291 aaPredicted RBP12.57□□□□□ -0.4
TRAM1-204ENST00000521049 CD40LGP29965 261 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 PPP1CCP36873 323 aaKnown RBP12.57□□□□□ -0.4
TRAM1-204ENST00000521049 OR3A3P47888 321 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 RIPK1Q13546 671 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 GNMTQ14749 295 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 LRRC36Q1X8D7 754 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 ZIK1Q3SY52 487 aaPredicted RBP12.57□□□□□ -0.4
TRAM1-204ENST00000521049 ACTBL2Q562R1 376 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 HAPLN4Q86UW8 402 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 OR52I1Q8NGK6 324 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 RHOXF1Q8NHV9 184 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 FBXL15Q9H469 300 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 CNOT2Q9NZN8 540 aaKnown RBP12.57□□□□□ -0.4
TRAM1-204ENST00000521049 LRRC42Q9Y546 428 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 A3GALT2U3KPV4 340 aa12.57□□□□□ -0.4
TRAM1-204ENST00000521049 H0Y980 276 aa12.56□□□□□ -0.4
TRAM1-204ENST00000521049 CIB2O75838 187 aa12.56□□□□□ -0.4
TRAM1-204ENST00000521049 LIMS3P0CW19 117 aa12.56□□□□□ -0.4
TRAM1-204ENST00000521049 LIMS4P0CW20 117 aa12.56□□□□□ -0.4
TRAM1-204ENST00000521049 FUT3P21217 361 aa12.56□□□□□ -0.4
TRAM1-204ENST00000521049 FAM71F2Q6NXP2 309 aa12.56□□□□□ -0.4
TRAM1-204ENST00000521049 PPP1R27Q86WC6 154 aa12.56□□□□□ -0.4
TRAM1-204ENST00000521049 MS4A10Q96PG2 267 aa12.56□□□□□ -0.4
TRAM1-204ENST00000521049 RNF5Q99942 180 aa12.56□□□□□ -0.4
TRAM1-204ENST00000521049 RSRP1Q9BUV0 290 aa12.56□□□□□ -0.4
TRAM1-204ENST00000521049 RANGRFQ9HD47 186 aaPredicted RBP12.56□□□□□ -0.4
TRAM1-204ENST00000521049 RPL36Q9Y3U8 105 aaKnown RBP12.56□□□□□ -0.4
TRAM1-204ENST00000521049 SAA2-SAA4A0A096LPE2 208 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 MAS1P04201 325 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 SAA2P0DJI9 122 aaPredicted RBP12.55□□□□□ -0.4
TRAM1-204ENST00000521049 ZP3P21754 424 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 MC5RP33032 325 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 ALDH3A2P51648 485 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 TPPP2P59282 170 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 PLGLAQ15195 96 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 XAF1Q6GPH4 301 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 UNQ5815/PRO19632Q6UWF5 114 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 GLIPR1L1Q6UWM5 242 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 ZNF562Q6V9R5 426 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 GALMQ96C23 342 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 ORAI1Q96D31 301 aa12.55□□□□□ -0.4
TRAM1-204ENST00000521049 UBE2QL1A1L167 161 aa12.54□□□□□ -0.4
TRAM1-204ENST00000521049 EI24O14681 340 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms