RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 DAOP14920 347 aa12.02□□□□□ -0.48
CLN8-204ENST00000519254 LUMP51884 338 aaPredicted RBP12.02□□□□□ -0.48
CLN8-204ENST00000519254 AP2S1P53680 142 aaPredicted RBP12.02□□□□□ -0.48
CLN8-204ENST00000519254 RAB32Q13637 225 aa12.02□□□□□ -0.48
CLN8-204ENST00000519254 C6orf183Q5T699 404 aa12.02□□□□□ -0.48
CLN8-204ENST00000519254 FAM53AQ6NSI3 398 aaPredicted RBP12.02□□□□□ -0.48
CLN8-204ENST00000519254 FAM219AQ8IW50 185 aa12.02□□□□□ -0.48
CLN8-204ENST00000519254 CMTM1Q8IZ96 169 aa12.02□□□□□ -0.48
CLN8-204ENST00000519254 KCNRGQ8N5I3 272 aa12.02□□□□□ -0.48
CLN8-204ENST00000519254 ZNRF1Q8ND25 227 aa12.02□□□□□ -0.48
CLN8-204ENST00000519254 PPIAL4AQ9Y536 164 aa12.02□□□□□ -0.48
CLN8-204ENST00000519254 A0A0D9SG52 128 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 LGALS8O00214 317 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 MGST3O14880 152 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 KCNAB3O43448 404 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 TNFSF12O43508 249 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 HTR2BP41595 481 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 EXOSC2Q13868 293 aaKnown RBP12.02□□□□□ -0.49
CLN8-204ENST00000519254 EDDM3AQ14507 147 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 ZNF345Q14585 488 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 STUMQ69YW2 141 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 ACOT7LQ6ZUV0 252 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 OR52L2PQ8NGH6 319 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 TMEM56Q96MV1 263 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 TOLLIPQ9H0E2 274 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 UBE2J1Q9Y385 318 aaPredicted RBP12.02□□□□□ -0.49
CLN8-204ENST00000519254 TMEM56-RWDD3S4R434 201 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 USF3Q68DE3 2245 aa12.02□□□□□ -0.49
CLN8-204ENST00000519254 TRAV38-1A0A0B4J264 116 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 ODAMA1E959 279 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 C15orf65H3BRN8 121 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 OR2F2O95006 317 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 SELLP14151 372 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 IL2RGP31785 369 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 SSTR5P35346 364 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 OR2F1Q13607 317 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 GNMTQ14749 295 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 TEX36Q5VZQ5 186 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 PRSS54Q6PEW0 395 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 SELENOHQ8IZQ5 122 aaKnown RBP12.01□□□□□ -0.49
CLN8-204ENST00000519254 PPP1R35Q8TAP8 253 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 MARVELD3Q96A59 401 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 SDSLQ96GA7 329 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 CCL13Q99616 98 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 DNTTIP1Q9H147 329 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 OR5AC2Q9NZP5 309 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 ITGB1BP2Q9UKP3 347 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 DCHS2Q6V1P9 2916 aa12.01□□□□□ -0.49
CLN8-204ENST00000519254 A0A1B0GW55 424 aa12□□□□□ -0.49
CLN8-204ENST00000519254 MEX3AA1L020 520 aaKnown RBP12□□□□□ -0.49
CLN8-204ENST00000519254 H0Y980 276 aa12□□□□□ -0.49
CLN8-204ENST00000519254 OVOL3O00110 214 aa12□□□□□ -0.49
CLN8-204ENST00000519254 RP2O75695 350 aa12□□□□□ -0.49
CLN8-204ENST00000519254 CDS2O95674 445 aa12□□□□□ -0.49
CLN8-204ENST00000519254 IFNA7P01567 189 aa12□□□□□ -0.49
CLN8-204ENST00000519254 OR8U9P0C7N5 309 aa12□□□□□ -0.49
CLN8-204ENST00000519254 DUX4L2P0CJ85 424 aa12□□□□□ -0.49
CLN8-204ENST00000519254 DUX4L3P0CJ86 424 aa12□□□□□ -0.49
CLN8-204ENST00000519254 DUX4L4P0CJ87 422 aa12□□□□□ -0.49
CLN8-204ENST00000519254 DUX4L5P0CJ88 424 aa12□□□□□ -0.49
CLN8-204ENST00000519254 DUX4L6P0CJ89 424 aa12□□□□□ -0.49
CLN8-204ENST00000519254 DUX4L7P0CJ90 424 aa12□□□□□ -0.49
CLN8-204ENST00000519254 MUC1P15941 1255 aaPredicted RBP12□□□□□ -0.49
CLN8-204ENST00000519254 F2RP25116 425 aa12□□□□□ -0.49
CLN8-204ENST00000519254 UCP1P25874 307 aa12□□□□□ -0.49
CLN8-204ENST00000519254 SRPXP78539 464 aa12□□□□□ -0.49
CLN8-204ENST00000519254 CR1LQ2VPA4 569 aa12□□□□□ -0.49
CLN8-204ENST00000519254 AVPI1Q5T686 147 aa12□□□□□ -0.49
CLN8-204ENST00000519254 TMEM268Q5VZI3 342 aa12□□□□□ -0.49
CLN8-204ENST00000519254 ZNF787Q6DD87 383 aa12□□□□□ -0.49
CLN8-204ENST00000519254 DUX4L9Q6RFH8 374 aaPredicted RBP12□□□□□ -0.49
CLN8-204ENST00000519254 ZNF561Q8N587 486 aa12□□□□□ -0.49
CLN8-204ENST00000519254 SLC35G3Q8N808 338 aa12□□□□□ -0.49
CLN8-204ENST00000519254 OR8U1Q8NH10 309 aa12□□□□□ -0.49
CLN8-204ENST00000519254 DCUN1D4Q92564 292 aa12□□□□□ -0.49
CLN8-204ENST00000519254 ARL11Q969Q4 196 aa12□□□□□ -0.49
CLN8-204ENST00000519254 C14orf79Q96F83 325 aa12□□□□□ -0.49
CLN8-204ENST00000519254 RRNAD1Q96FB5 475 aaKnown RBP12□□□□□ -0.49
CLN8-204ENST00000519254 DUX4Q9UBX2 424 aa12□□□□□ -0.49
CLN8-204ENST00000519254 DOPEY2Q9Y3R5 2298 aa12□□□□□ -0.49
CLN8-204ENST00000519254 NKX6-3A6NJ46 265 aa12□□□□□ -0.49
CLN8-204ENST00000519254 F12P00748 615 aaPredicted RBP12□□□□□ -0.49
CLN8-204ENST00000519254 WNT2P09544 360 aa12□□□□□ -0.49
CLN8-204ENST00000519254 EFNA4P52798 201 aa12□□□□□ -0.49
CLN8-204ENST00000519254 TRAT1Q6PIZ9 186 aa12□□□□□ -0.49
CLN8-204ENST00000519254 FAM216BQ8N7L0 139 aa12□□□□□ -0.49
CLN8-204ENST00000519254 OR1S1Q8NH92 325 aa12□□□□□ -0.49
CLN8-204ENST00000519254 RFESDQ8TAC1 157 aa12□□□□□ -0.49
CLN8-204ENST00000519254 AKR1E2Q96JD6 320 aa12□□□□□ -0.49
CLN8-204ENST00000519254 GAFA1Q96PS6 74 aa12□□□□□ -0.49
CLN8-204ENST00000519254 TMED3Q9Y3Q3 217 aa12□□□□□ -0.49
CLN8-204ENST00000519254 TMPRSS2O15393 492 aa11.99□□□□□ -0.49
CLN8-204ENST00000519254 PPIHO43447 177 aaKnown RBP11.99□□□□□ -0.49
CLN8-204ENST00000519254 GZMHP20718 246 aa11.99□□□□□ -0.49
CLN8-204ENST00000519254 S100GP29377 79 aa11.99□□□□□ -0.49
CLN8-204ENST00000519254 PPP1CCP36873 323 aaKnown RBP11.99□□□□□ -0.49
CLN8-204ENST00000519254 P2RX3P56373 397 aa11.99□□□□□ -0.49
CLN8-204ENST00000519254 S100A10P60903 97 aa11.99□□□□□ -0.49
CLN8-204ENST00000519254 ZNF788Q6ZQV5 615 aa11.99□□□□□ -0.49
CLN8-204ENST00000519254 INO80EQ8NBZ0 244 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms