RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 SPRNQ5BIV9 151 aa-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 LPCAT4Q643R3 524 aa-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 DRAM2Q6UX65 266 aa-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 ZNF705AQ6ZN79 300 aaPredicted RBP-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 MTERF4Q7Z6M4 381 aaKnown RBP-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 APRG1Q8IVJ8 170 aa-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 TTC29Q8NA56 475 aaPredicted RBP-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 SYAP1Q96A49 352 aaPredicted RBP-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 PRSS27Q9BQR3 290 aa-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 SHCBP1LQ9BZQ2 653 aa-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 SLC7A5P2Q9GIP4 190 aa-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 C1orf21Q9H246 121 aa-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 SCML1Q9UN30 329 aa-1.97□□□□□ -2.72
SCARNA23-201ENST00000516060 ABCC9O60706 1549 aa-1.97□□□□□ -2.73
SCARNA23-201ENST00000516060 GREB1Q4ZG55 1949 aa-1.97□□□□□ -2.73
SCARNA23-201ENST00000516060 MTUS2Q5JR59 1369 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 A0A1W2PRQ8 180 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 H7C2G1 150 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 CCL25O15444 150 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 PRPSAP2O60256 369 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 ZMPSTE24O75844 475 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 CRYBA1P05813 215 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 GFAPP14136 432 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 BRS3P32247 399 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 PPP1CCP36873 323 aaKnown RBP-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 CNBPP62633 177 aaKnown RBP-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 TOMM34Q15785 309 aaPredicted RBP-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 ANKDD1AQ495B1 522 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 THOC7Q6I9Y2 204 aaKnown RBP-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 CCDC110Q8TBZ0 833 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 ZFAND1Q8TCF1 268 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 TMEM234Q8WY98 164 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 VAT1Q99536 393 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 CHID1Q9BWS9 393 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 UCK2Q9BZX2 261 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 YIPF3Q9GZM5 350 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 RIBC2Q9H4K1 309 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 FIS1Q9Y3D6 152 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 WNK1Q9H4A3 2382 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 ATP8B3O60423 1300 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 NRCAMQ92823 1304 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 FLT4P35916 1363 aa-1.98□□□□□ -2.73
SCARNA23-201ENST00000516060 PHRF1Q9P1Y6 1649 aaKnown RBP-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 RYR2Q92736 4967 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 DOPEY2Q9Y3R5 2298 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 KBTBD11-OT1A0A1B0GTJ5 212 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 NUPR2A6NF83 97 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 C2orf70A6NJV1 201 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 SDCBPO00560 298 aaPredicted RBP-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 PEX11AO75192 247 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 CCNB2O95067 398 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 C1QAP02745 245 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 CATP04040 527 aaKnown RBP-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 TACSTD2P09758 323 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 MX1P20591 662 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 CRYBB3P26998 211 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 ARL2P36404 184 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 MAP2K4P45985 399 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 TAS2R39P59534 338 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 UBE2MP61081 183 aaKnown RBP-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 CEP55Q53EZ4 464 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 TMEM107Q6UX40 140 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 SOSTDC1Q6X4U4 206 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 SLC13A5Q86YT5 568 aaPredicted RBP-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 LINC00471Q8N535 108 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 DRAXINQ8NBI3 349 aaPredicted RBP-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 OR7G2Q8NG99 324 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 NT5CQ8TCD5 201 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 XPO6Q96QU8 1125 aaKnown RBP-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 C11orf49Q9H6J7 331 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 SLC2A9Q9NRM0 540 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 POMPQ9Y244 141 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 MRPS7Q9Y2R9 242 aaKnown RBP-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 TIMM9Q9Y5J7 89 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 EPG5Q9HCE0 2579 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 KIF24Q5T7B8 1368 aa-1.99□□□□□ -2.73
SCARNA23-201ENST00000516060 DNAH6Q9C0G6 4158 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 TRAV7A0A075B6U4 112 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 A0A1B0GXF2 115 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 H3BP45 60 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 CPLX1O14810 134 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 EIF3HO15372 352 aaKnown RBP eCLIP-2□□□□□ -2.73
SCARNA23-201ENST00000516060 MAGEB3O15480 346 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 HUS1O60921 280 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 MYO1DO94832 1006 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 NPYP01303 97 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 MYL2P10916 166 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 GAP43P17677 238 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 PSMA5P28066 241 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 CRATP43155 626 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 MRPL19P49406 292 aaKnown RBP-2□□□□□ -2.73
SCARNA23-201ENST00000516060 TPI1P60174 286 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 PRAMEF5Q5TYX0 476 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 PRAMEF6Q5VXH4 476 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 RNASEKQ6P5S7 137 aaKnown RBP-2□□□□□ -2.73
SCARNA23-201ENST00000516060 GLIPR1L1Q6UWM5 242 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 FAM19A3Q7Z5A8 133 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 DHFR2Q86XF0 187 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 TOP1MTQ969P6 601 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 C8orf33Q9H7E9 229 aaPredicted RBP-2□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms