RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 CHCHD2Q9Y6H1 151 aaPredicted RBP11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 C3orf80F5H4A9 247 aa11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 PPP1CBP62140 327 aa11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 MEF2BQ02080 365 aaPredicted RBP11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 KCNE4Q8WWG9 221 aa11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 CTDSP1Q9GZU7 261 aa11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 TWSG1Q9GZX9 223 aa11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 SPINK4O60575 86 aa11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 GNG3P63215 75 aa11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 ZNF468Q5VIY5 522 aaPredicted RBP11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 FER1L6-AS2Q96M78 137 aa11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 WNT5BQ9H1J7 359 aa11.91□□□□□ -0.5
TSPAN17-208ENST00000514705 A0A087WWC5 75 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 H0Y980 276 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 ARG2P78540 354 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 SPSB3Q6PJ21 355 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 C1QL4Q86Z23 238 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 TMEM54Q969K7 222 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 PCDH15Q96QU1 1955 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 TMEM204Q9BSN7 226 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 GNG12Q9UBI6 72 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 CLN8Q9UBY8 286 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 LRP5LA4QPB2 252 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 A8MXE2 369 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 COL10A1Q03692 680 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 ACOT6Q3I5F7 207 aaPredicted RBP11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 HES3Q5TGS1 186 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 PLEKHA3Q9HB20 300 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 PLA2G3Q9NZ20 509 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 OR1A1Q9P1Q5 309 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 TIMM8BQ9Y5J9 83 aaPredicted RBP11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 LRRC3CA6NJW4 275 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 DEFB108AA8MXU0 73 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 SYNGR3O43761 229 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 NEIL1Q96FI4 390 aaPredicted RBP11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 ATP23Q9Y6H3 246 aa11.9□□□□□ -0.5
TSPAN17-208ENST00000514705 SLC31A2O15432 143 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 BTNL3Q6UXE8 466 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 LRTM2Q8N967 370 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 OR4X1Q8NH49 305 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 HIST1H2BLQ99880 126 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 SF3B5Q9BWJ5 86 aaKnown RBP11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 CISD1Q9NZ45 108 aaKnown RBP11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 TP53TG5Q9Y2B4 290 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 C11orf94C9JXX5 98 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 F6UZH7 168 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 ZNF25P17030 456 aaPredicted RBP11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 CTSSP25774 331 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 SRD5A2P31213 254 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 G6PCP35575 357 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 PMELP40967 661 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 FGF12P61328 243 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 SLC10A1Q14973 349 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 C14orf144Q96I85 54 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 CBLN4Q9NTU7 201 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 FKBP11Q9NYL4 201 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 MBP02144 154 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 GYPAP02724 150 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 ERVK-16P61578 105 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 OR5D13Q8NGL4 314 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 NANOS1Q8WY41 292 aaKnown RBP11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 A0A1W2PQM1 296 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 UCP1P25874 307 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 FGFBP3Q8TAT2 258 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 OR2D2Q9H210 308 aa11.89□□□□□ -0.51
TSPAN17-208ENST00000514705 IGHV3-43A0A0B4J1X8 118 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 NGFP01138 241 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 IGHV3-13P01766 116 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 IGHV3-7P01780 117 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 SNRPCP09234 159 aaKnown RBP11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 IGHV3-43DP0DP04 118 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 SLC25A53Q5H9E4 307 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 DPPA3Q6W0C5 159 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 TUSC5Q8IXB3 177 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 NABP1Q96AH0 204 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 IL17BQ9UHF5 180 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 hCG_38984A0A1B0GV85 526 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 ZIC3O60481 467 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 OR3A1P47881 315 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 SPINK14Q6IE38 97 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 DBX2Q6ZNG2 339 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 TAF15Q92804 592 aaKnown RBP eCLIP11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 DDA1Q9BW61 102 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 SDF2L1Q9HCN8 221 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 PARD6AQ9NPB6 346 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 DUXBA0A1W2PPF3 345 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 SH2D1BO14796 132 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 HIST1H3AP68431 136 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 SERF2P84101 59 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 PRAMEF5Q5TYX0 476 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 PRAMEF6Q5VXH4 476 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 OR4A16Q8NH70 328 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 RTL8AQ9BWD3 113 aa11.88□□□□□ -0.51
TSPAN17-208ENST00000514705 ARGFXA6NJG6 315 aa11.87□□□□□ -0.51
TSPAN17-208ENST00000514705 FAM157AC9JC47 383 aa11.87□□□□□ -0.51
TSPAN17-208ENST00000514705 M0R143 59 aa11.87□□□□□ -0.51
TSPAN17-208ENST00000514705 PTGDSP41222 190 aa11.87□□□□□ -0.51
TSPAN17-208ENST00000514705 CDC34P49427 236 aaPredicted RBP11.87□□□□□ -0.51
TSPAN17-208ENST00000514705 ID3Q02535 119 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms