RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 GPX8Q8TED1 209 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 YPEL2Q96QA6 119 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 GINS4Q9BRT9 223 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 ZNF230Q9UIE0 474 aaPredicted RBP16.4■□□□□ 0.22
USP53-208ENST00000514305 ANXA10Q9UJ72 324 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 ELF5Q9UKW6 265 aaPredicted RBP16.4■□□□□ 0.22
USP53-208ENST00000514305 FAM96BQ9Y3D0 163 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 MINOS1-NBL1R4GNA1 71 aa16.4■□□□□ 0.22
USP53-208ENST00000514305 NPFFO15130 113 aa16.39■□□□□ 0.21
USP53-208ENST00000514305 SSX5O60225 188 aa16.39■□□□□ 0.21
USP53-208ENST00000514305 MMP23AO75900 390 aa16.39■□□□□ 0.21
USP53-208ENST00000514305 SCTP09683 121 aa16.39■□□□□ 0.21
USP53-208ENST00000514305 RCVRNP35243 200 aa16.39■□□□□ 0.21
USP53-208ENST00000514305 ARHGDIBP52566 201 aa16.39■□□□□ 0.21
USP53-208ENST00000514305 ZNF626Q68DY1 528 aa16.39■□□□□ 0.21
USP53-208ENST00000514305 GHITMQ9H3K2 345 aa16.39■□□□□ 0.21
USP53-208ENST00000514305 SLC23A1Q9UHI7 598 aa16.39■□□□□ 0.21
USP53-208ENST00000514305 DSCAML1Q8TD84 2053 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 MEIOCA2RUB1 952 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 IGHV4-38-2P0DP08 117 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 HTR1DP28221 377 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 ETV6P41212 452 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 OR3A3P47888 321 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 RAB7AP51149 207 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 TAS2R46P59540 309 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 C9orf139Q6ZV77 190 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 PDZD9Q8IXQ8 264 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 OR10X1Q8NGY0 326 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 CABLES2Q9BTV7 478 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 NECAP2Q9NVZ3 263 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 TAS2R8Q9NYW2 309 aa16.38■□□□□ 0.21
USP53-208ENST00000514305 IGHV3OR16-10A0A075B7F0 116 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 J3QR06 171 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 ITGB1BP1O14713 200 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 GSTT2P0CG29 244 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 GSTT2BP0CG30 244 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 CEACAM6P40199 344 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 LOXL3P58215 753 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 KLRD1Q13241 179 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 MORN2Q502X0 79 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 ACTBL2Q562R1 376 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 SHISA2Q6UWI4 295 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 CCDC190Q86UF4 302 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 LINC00311Q8N616 119 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 OR2AK2Q8NG84 335 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 UBALD1Q8TB05 177 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 ZNF48Q96MX3 618 aaPredicted RBP16.37■□□□□ 0.21
USP53-208ENST00000514305 ABHD1Q96SE0 405 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 ZNF747Q9BV97 191 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 MMP28Q9H239 520 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 ZNF107Q9UII5 783 aaPredicted RBP16.37■□□□□ 0.21
USP53-208ENST00000514305 PSG11Q9UQ72 335 aa16.37■□□□□ 0.21
USP53-208ENST00000514305 IGHV3-43A0A0B4J1X8 118 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 LEUTXA8MZ59 168 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 BET1O15155 118 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 RNASE1P07998 156 aaKnown RBP16.36■□□□□ 0.21
USP53-208ENST00000514305 FBP1P09467 338 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 IGHV3-43DP0DP04 118 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 PTHLHP12272 177 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 GDNFP39905 211 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 ZNF45Q02386 682 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 PYDC2Q56P42 97 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 OR5AP2Q8NGF4 316 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 OR52L2PQ8NGH6 319 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 S100ZQ8WXG8 99 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 MAFIPQ8WZ33 124 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 MALSU1Q96EH3 234 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 DPM3Q9P2X0 92 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 KIAA2026Q5HYC2 2103 aa16.36■□□□□ 0.21
USP53-208ENST00000514305 TRBV6-7A0A0A0MS04 114 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 MEIS3P1A6NDR6 274 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 ODF3BA8MYP8 253 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 OOSP1A8MZH6 123 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 CLDN34H7C241 214 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 NAT1P18440 290 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 TBPP20226 339 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 LORP23490 312 aaPredicted RBP16.35■□□□□ 0.21
USP53-208ENST00000514305 GNG10P50151 68 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 MADCAM1Q13477 382 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 HLA-DRB5Q30154 266 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 HCP5Q6MZN7 132 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 CCDC144NLQ6NUI1 221 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 GVQW1Q8N7I0 195 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 OR10V1Q8NGI7 309 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 OR5H2Q8NGV7 314 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 SMIM4Q8WVI0 70 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 CYYR1Q96J86 154 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 SOSTQ9BQB4 213 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 TOLLIPQ9H0E2 274 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 MTFP1Q9UDX5 166 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 ANAPC10Q9UM13 185 aa16.35■□□□□ 0.21
USP53-208ENST00000514305 RBM7Q9Y580 266 aaKnown RBP16.35■□□□□ 0.21
USP53-208ENST00000514305 A0A1W2PRD5 423 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 A0A1W2PRF3 423 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 A0A1W2PRM7 423 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 FAM172BPA6NC97 362 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 GSTZ1O43708 216 aaPredicted RBP16.34■□□□□ 0.21
USP53-208ENST00000514305 IGLV1-47P01700 117 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 CSF1P09603 554 aa16.34■□□□□ 0.21
USP53-208ENST00000514305 SAA4P35542 130 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms